Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0692 ATGAAGATAGCAGTGGAGGGTTGCATGCATGGCGACCTTGACATTGTCTACAAAACTATTCAACATCTTGAAAAAGTACAAAACACCAAAATCGACCTCCTCATCTGCTGCGGCGATTTTCAGGCTGTCCGAAACGAAGAAGATTTGAAGAGCTTGAATGTGCCGCCGCGCTATCGCTCTATGAAGTCATTCTGGAAGTACTATTCGGGAATGGAGGTTGCCCCGTATCCGACAATATTCATTGGTGGAAACCACGAAGCATCTAATTATTTGTGGGAATTGTACTATGGAGGATGGGCTGCGCCTAATATATATTTCTTGGGAGTTGCAGGGGTGGTCAGGTCTGTGTATCATGTTCGTGAATATGATGTTCACAAGCTCAGTCAAGTTGAGGAACCAATTGATATCTTTCTTTCGCATGATTGGCCAGTGGGAATCACTGATTGTGGGAATTGGAAGGATCTGATTCAGCGCAAACATTTTTTTAAGCAAGAGATAGAGGAAAGAAGACTTGGGAGTAAAGCTGCTGCGCAACTCCTGGAAAAATTGAAACCACCGTTTTGGTTTTCAGCTCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGGGACGGTGGTCCTCAGACAAAATTTCTCGCACTTGATAAGTGCATTGCTGGTCGGGATTTCTTACAGATTGTGGAAATTGAATCAGAGGCCGGACCTTATGAAATTCAGTATGATGAAGAATGGTTAGCTATAACACGGAGGTTCAACTCTGTCTTCCCTCTAACTGCCAAAGCTGCAGATTTCAAAGTTATAGATCTTGAGATGGAGGAGTGTCGTCAATGGGTTAGAAGCAGGCTGCAAGAGAGAGGGTACAAGCCTTTTGAATTTGTTAGAACGGCTCCATGTCACAATCCTTCTCAAGCCAATATTGAGGTTAGTCCTCGAAATCCACAGACAGTGTGTCTTTTACAGCTCCTAGGACTTCCGTATCTTCTTGATAGCATTCCTGAACCGCAGGGCTTATCACCTTATCCTTATCCTTCAATTCAAAGAGGTCCCATTGGTTATGACAGCGAACCAATTGATGATGTCGATGATGATGAATAA 1098 0.4362 MKIAVEGCMHGDLDIVYKTIQHLEKVQNTKIDLLICCGDFQAVRNEEDLKSLNVPPRYRSMKSFWKYYSGMEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVVRSVYHVREYDVHKLSQVEEPIDIFLSHDWPVGITDCGNWKDLIQRKHFFKQEIEERRLGSKAAAQLLEKLKPPFWFSAHLHCKFAALVQHGDGGPQTKFLALDKCIAGRDFLQIVEIESEAGPYEIQYDEEWLAITRRFNSVFPLTAKAADFKVIDLEMEECRQWVRSRLQERGYKPFEFVRTAPCHNPSQANIEVSPRNPQTVCLLQLLGLPYLLDSIPEPQGLSPYPYPSIQRGPIGYDSEPIDDVDDDE 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0692 365 Pfam Lariat debranching enzyme, C-terminal domain 209 326 IPR007708 GO:0006397|GO:0016788
Lele01g0692 365 Gene3D - 1 213 IPR029052 -
Lele01g0692 365 SUPERFAMILY Metallo-dependent phosphatases 1 201 IPR029052 -
Lele01g0692 365 SMART DBR1_2 201 329 IPR007708 GO:0006397|GO:0016788
Lele01g0692 365 MobiDBLite consensus disorder prediction 339 365 - -
Lele01g0692 365 CDD MPP_Dbr1_N 3 225 IPR041816 -
Lele01g0692 365 PANTHER RNA LARIAT DEBRANCHING ENZYME 113 331 - -
Lele01g0692 365 Pfam Calcineurin-like phosphoesterase 1 195 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0692 Lele-ChrLele01 4060555 4064029 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0692 01 4060555 4064029 Lele03g0689 03 4071849 4075307 hybridization
Lele01g0692 01 4060555 4064029 Lele04g0693 04 4210726 4213893 hybridization