Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0689 ATGAAGATAGCAGTGGAGGGTTGCATGCATGGCGACCTCGACATTGTCTACAAAACTATTCAACATCTTGAAAAAGTACAAAACACCAAAATCGACCTCCTCATCTGCTGCGGCGATTTTCAGGCTGTCCGAAACGAAGAAGATTTGAAGAGCTTGAATGTGCCGCCGCGCTATCGCTCTATGAAGTCATTCTGGAAGTACTATTCGGGAATGGAGGTTGCCCCGTATCCGACAATATTCATTGGTGGAAACCACGAAGCATCTAATTATTTGTGGGAATTGTACTATGGAGGATGGGCTGCGCCTAATATATATTTCTTGGGAGTTGCAGGGGTGATCAGGTTTGGGAATATCCGAATTGGTGGAGTGTCTGGGATTTATAATGCTCGTCATTATAAATCAGGACATTTTGAGAGGCCTCCTTATGATCAAAATACAATCAGGTCTGTGTATCATGTCCGTGAATATGATGTTCACAAGTTCAGTCAAGTTGAGGAACCAATTGATATATTTCTTTCGCATGATTGGCCAGTGGGAATCACTGATTGCGGGAATTGGAAGGATCTGATTCAGCGCAAACATTTTTTTAAGCAAGAGATAGAGGAAAGAAGACTTGGGAGTAAAGCTGCTGCGCAACTCCTGGAAAAATTGAAACCACCGTTTTGGTTTTCAGCTCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGGGACGGTGGTCCTCAGACAAAATTTCTTGCACTTGATAAGTGCATTGCTGGTCGGGATTTCTTACAGATTGTGGAAATTGAATCAGAGGCCGGACCTTATGAAATTCAGTATGATGAAGAATGGTTAGCTATAACACGGAGGTTCAACTCTGTCTTCCCTCTAACTGCCAAAGCTGCGGAGTTCAAAGTTATAGATCTTGAGATGGAGGACTGTCGTCAATGGGTTAGAAGCAGGCTGCAAGAGAGAGGGTACAAGCCTTTTGAATTTGTTAGAACGGCTTCATGTCACAATCCTTCTCAATCCAATATTGAGGGTACCTTTGCTGTGAGTCCTCGAAATCCACAGACAGAGTGTCTTTTGCAGCTCCTAGGACTTCCGTATCTTCTTGATAGCATTCCTGAACCGCAGGGCTTATCACCTTATCCTTCTCCTTCAATTCAGAGAGGTCCCATTGGTTATGACAGCGAACCAATTGATGATGTCGATGATGATGAATAA 1212 0.4348 MKIAVEGCMHGDLDIVYKTIQHLEKVQNTKIDLLICCGDFQAVRNEEDLKSLNVPPRYRSMKSFWKYYSGMEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVIRFGNIRIGGVSGIYNARHYKSGHFERPPYDQNTIRSVYHVREYDVHKFSQVEEPIDIFLSHDWPVGITDCGNWKDLIQRKHFFKQEIEERRLGSKAAAQLLEKLKPPFWFSAHLHCKFAALVQHGDGGPQTKFLALDKCIAGRDFLQIVEIESEAGPYEIQYDEEWLAITRRFNSVFPLTAKAAEFKVIDLEMEDCRQWVRSRLQERGYKPFEFVRTASCHNPSQSNIEGTFAVSPRNPQTECLLQLLGLPYLLDSIPEPQGLSPYPSPSIQRGPIGYDSEPIDDVDDDE 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0689 403 CDD MPP_Dbr1_N 3 259 IPR041816 -
Lele03g0689 403 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Lele03g0689 403 SUPERFAMILY Metallo-dependent phosphatases 1 235 IPR029052 -
Lele03g0689 403 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 370 - -
Lele03g0689 403 Pfam Lariat debranching enzyme, C-terminal domain 243 364 IPR007708 GO:0006397|GO:0016788
Lele03g0689 403 MobiDBLite consensus disorder prediction 374 403 - -
Lele03g0689 403 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Lele03g0689 403 FunFam Lariat debranching enzyme 9 251 - -
Lele03g0689 403 Gene3D - 3 235 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0689 Lele-ChrLele03 4071849 4075307 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0692 01 4060555 4064029 Lele03g0689 03 4071849 4075307 hybridization
Lele02g0678 02 4071436 4074717 Lele03g0689 03 4071849 4075307 hybridization