Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0693 ATGAGGATAGCAGTGGAGGGTTGCATGCATGGCGACCTCGACATTGTCTACAAAACTATCCAACGTCTTGAAAAAGTACAAAACACCAAAATCGACCTCCTCATCTGCTGCGGCGATTTTCAGGCTGTCCGAAACGAAGGAGATTTGAAGAGCTTGAATGTGCCGCCGCGCTATCGCTCTATGAAGTCATTCTGGAAGTACTATTCGGGAATGGAGGTTGCCCCGTATCCGACAATATTCATTGGTGGAAACCATGAAGCATCTAATTATTTGTGGGAATTGTACTATGGAGGATGGGCGGCGCCTAATATATATTTCTTGGGAGTTGCAGGGGTGGTCAGGTTTGGGAATATCCGAATTGGTGGAGTGTCTGGGATTTATAATGCACGCCATTATAAATCAGGACATTTTGAGAGGCCTCCTTATGATCAAAATACAATCAGGTCTGTGTATCATGTTCGTGAATACGATGTTCACAAGCTCATTCAAGTTGAGGAACCAATTGATATCTTTCTTTCGCATGACTGGCCATTGGGAATCACTGATTGTGGGGATTGGAAGGATCTCATTCAGCGCAAATATTTTTTTCAGCAGGAGATAGAGGAAAGAAGACTTGGGAGCAAGGCTGCTGCACAACTTCTGGAAAAATTGAAACCACAATATTGGTTTTCAGCTCACTTACACTGCAAGTTTGCTGCTCTTGTTCAACATGGGGATGGGGGTCCTCAGACAAAATTTCTTGCACTTGATAAGTGCATTGCTGGTCGGGATTTCTTACAGATTGTGGAAATTGAATCAGAGGCAGGACCTTATGAAATTCATTATGATGAAGAATGGTTAGCTATAACACGGAGGTTCAACTCTGTCTTCCCTCTAACTGCCAAAGCTGCAGATTTCAAAGGTATAGATCTTGAGATGGAGGACTGTCGTCAATGGGTTAGAAGCAGGATGCAAGAGAGAGGGTACAAGCCTTTTGAATTTTTTAGAACTGCTCCATGTTACAATCCTTCTCAATCCAATATTGAGGGCACCTTTGCTGGGAATCCTCGAAATCCGCAGACAGAATCTCTTTTGCAGCTCCTAGGACTTCCGTATCTTCTTGATAGCATTCCTGAACCACAGGGCTTATCACCTTATCCTTCTTCTTCTATTCAAAGAGGTACCATTGGTTATGACAGCGAAGACATTCCAATTAATGACGGAGATGATGTCGATGATGATGAATAA 1227 0.4319 MRIAVEGCMHGDLDIVYKTIQRLEKVQNTKIDLLICCGDFQAVRNEGDLKSLNVPPRYRSMKSFWKYYSGMEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVVRFGNIRIGGVSGIYNARHYKSGHFERPPYDQNTIRSVYHVREYDVHKLIQVEEPIDIFLSHDWPLGITDCGDWKDLIQRKYFFQQEIEERRLGSKAAAQLLEKLKPQYWFSAHLHCKFAALVQHGDGGPQTKFLALDKCIAGRDFLQIVEIESEAGPYEIHYDEEWLAITRRFNSVFPLTAKAADFKGIDLEMEDCRQWVRSRMQERGYKPFEFFRTAPCYNPSQSNIEGTFAGNPRNPQTESLLQLLGLPYLLDSIPEPQGLSPYPSSSIQRGTIGYDSEDIPINDGDDVDDDE 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0693 408 Gene3D - 10 251 IPR029052 -
Lele04g0693 408 SUPERFAMILY Metallo-dependent phosphatases 1 235 IPR029052 -
Lele04g0693 408 Pfam Lariat debranching enzyme, C-terminal domain 243 364 IPR007708 GO:0006397|GO:0016788
Lele04g0693 408 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 406 - -
Lele04g0693 408 CDD MPP_Dbr1_N 3 259 IPR041816 -
Lele04g0693 408 MobiDBLite consensus disorder prediction 374 408 - -
Lele04g0693 408 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Lele04g0693 408 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Lele04g0693 408 MobiDBLite consensus disorder prediction 375 389 - -
Lele04g0693 408 FunFam Lariat debranching enzyme 9 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0693 Lele-ChrLele04 4210726 4213893 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0692 01 4060555 4064029 Lele04g0693 04 4210726 4213893 hybridization
Lele02g0678 02 4071436 4074717 Lele04g0693 04 4210726 4213893 hybridization