Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0590 ATGCCTCTCGGAGAAAGGGCAGGAGATAACACCGAATCACGTTATTGCGGTGTAGAGACGGATTTCAATGTTGACATGCCATACGTGCTGTCTCACCATCTCGTTTCTGGGGGATTCGATTTCGTTGTTGCACCTCTGATGGATCCTGCATATCGGCCGAGCTTAGTGCAGAAGGATAGTTTTGGTTCTGCTGTTCTTCCATTTGCTGGATCAGACTTAGTTGTGAGCCCTTCACAGTGGAGTACTCGTGTAGTGGGAAAAATTAGCTCATGGATAGATTTGGATTCAGAGGATGAAACCCTCATGATGGACTCTGAAACCACTCTCAGACAAGAAGTAGCTTGGGCGTCACATCTCTCTCTACAGGCTTGCCTTCTACCATCTCCCAAGAGAACATCTTGTGCTAATTATGCTAGATGTGTGAATCAAATCTTACAGAACCTAAATCATATGCAGCTGTTTCTTAGGATTCCATTGGTCATGTCTGATGATGATTCCATGGGTGCCAATTCTGAAACTTCAATTGATTCTTGGGAAACTTGGAATTCATTTCGTCTTCTCTGTGAGCATCATAGTCAATTGTCCATCGCACTTGATATTGTGAGTACCTTACCATCAGCAAACTCACTTGGACGCTGGTTTGGGGAGCCTGTTAGATCAGCTATAATTAGTACTGATTGCTTTTTGACTAATGCTCGTGGTTATCCATGCCTCTCAAAGCGCCACCAGATTCTAATTACTCGTTTTCTTAACCATTCTATACAGTTAATTATATCCGGAAAATCAGTTCATCCAAGAGCAAGTATGGATCCAGATGCTGCTCATGCTGCTGTGGAAAGACATCCTTTGAGGCCTTATCTGGACTATGTTGCTTATCTATACCAAAGAATGGATCCAATTCCTGAGCAAGAACGCTTTGAGCTTGGTTACAGGGACTTTTTACAGGCACCCTTGCAAGTAAGTACTCCTGATCTGCCCTTTAATTGTTTTTTGGCCTTTGTTTCTGTGTTGATTTTTCGCCAATTTGTGATGAATGATGAGGTGCTTTTTATAATAATTGTGCAGCCTCTCATGGATAATCTAGAGGCTCAAACCTATGAAACATTTGAGAAAGACACAGTGAAATACAGTCAGTATCAAAGAGCAATATGTAAAGCATTGCTGGATAGGGTTCCTGATGAAAAGGTGTCGGAAATTACCACTGTATTGATGGTTGTTGGTGCTGGGCGTGGGCCTCTTGTACGGGCATCACTAGAGGCAGCTGAAGAGACTGGGAGGAGGCTAAAAGTATATGCAGTGGAAAAGAATCCAAATGCAGTTGTTACCCTTAATAGTTTGATTAGGTTAGAGGGCTGGGAAGATACAGTTACCATAGTCTCAAGTGACATGCGCCACTGGATTGCCCCTGAAAAGGCCGACATATTGGTAAGTGAATTGCTAGGTTCTTTTGGTGACAATGAGCTGTCTCCTGAGTGCCTTGATGGAGCCCAGAGGTTTTTGAAGCAAGATGGAATTTCAATACCATCTTCGTACACAAGTTTCCTCCAACCAGTGACAGCTTCAAAGTTATATAATGATGTTAAGGCACATAAAGATATAGCACACTTTGAAACTGCTTATGTTGTGAAATTACACAATGTGGCTAGGCTGGCACCATCTCAACCTGTTTTTACATTTACTCACCCAAAACCCTCTGATATGGAAAGCAACCATCGATATAAGAAGTTACAATTTGAGATCCCTAATGACACTGGATCAGCTATGGTTCATGGGTTTGCTGGCTACTTCGATGCTACACTTTACAAAGATGTGCATCTTGGAATTGAACCCTCAACAGCAACGCCAAATATGTTCAGCTGGTTTGCAATATTTTTCCCATTAAGAGTACCCATTTGTGTGGAGCGGGGCGCTACTTTGGAAGTACATTTCTGGCGCTGTTGTGGTTCAACAAAGGTTTGGTATGAGTGGTGCGTTACATCTCCCGCTTCGTCTCCAATTCACAACAGCAATGGACGCTCCTACTGGGTTGGCCTTTAG 2037 0.43 MPLGERAGDNTESRYCGVETDFNVDMPYVLSHHLVSGGFDFVVAPLMDPAYRPSLVQKDSFGSAVLPFAGSDLVVSPSQWSTRVVGKISSWIDLDSEDETLMMDSETTLRQEVAWASHLSLQACLLPSPKRTSCANYARCVNQILQNLNHMQLFLRIPLVMSDDDSMGANSETSIDSWETWNSFRLLCEHHSQLSIALDIVSTLPSANSLGRWFGEPVRSAIISTDCFLTNARGYPCLSKRHQILITRFLNHSIQLIISGKSVHPRASMDPDAAHAAVERHPLRPYLDYVAYLYQRMDPIPEQERFELGYRDFLQAPLQVSTPDLPFNCFLAFVSVLIFRQFVMNDEVLFIIIVQPLMDNLEAQTYETFEKDTVKYSQYQRAICKALLDRVPDEKVSEITTVLMVVGAGRGPLVRASLEAAEETGRRLKVYAVEKNPNAVVTLNSLIRLEGWEDTVTIVSSDMRHWIAPEKADILVSELLGSFGDNELSPECLDGAQRFLKQDGISIPSSYTSFLQPVTASKLYNDVKAHKDIAHFETAYVVKLHNVARLAPSQPVFTFTHPKPSDMESNHRYKKLQFEIPNDTGSAMVHGFAGYFDATLYKDVHLGIEPSTATPNMFSWFAIFFPLRVPICVERGATLEVHFWRCCGSTKVWYEWCVTSPASSPIHNSNGRSYWVGL 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0590 678 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 350 656 IPR025799 GO:0016274|GO:0018216
Lele01g0590 678 PIRSF PRMT5 350 678 IPR007857 GO:0006479|GO:0008168|GO:0035246
Lele01g0590 678 PIRSF PRMT5 3 333 IPR007857 GO:0006479|GO:0008168|GO:0035246
Lele01g0590 678 Gene3D - 510 678 - -
Lele01g0590 678 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 365 677 IPR029063 -
Lele01g0590 678 FunFam Protein arginine N-methyltransferase 14 303 - -
Lele01g0590 678 Pfam PRMT5 arginine-N-methyltransferase 351 507 IPR035075 -
Lele01g0590 678 Pfam PRMT5 oligomerisation domain 510 676 IPR035248 -
Lele01g0590 678 FunFam Protein arginine N-methyltransferase 5 510 678 - -
Lele01g0590 678 Pfam PRMT5 TIM barrel domain 38 296 IPR035247 -
Lele01g0590 678 Gene3D - 14 302 - -
Lele01g0590 678 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 5 354 678 IPR025799 GO:0016274|GO:0018216
Lele01g0590 678 Gene3D Vaccinia Virus protein VP39 340 509 IPR029063 -
Lele01g0590 678 FunFam Protein arginine N-methyltransferase 5 342 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0590 Lele-ChrLele01 3466867 3474474 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0590 01 3466867 3474474 Lele01g0590 01 3466867 3474474 ECH
Lele01g0590 01 3466867 3474474 Lele03g0593 03 3494618 3502274 hybridization
Lele01g0590 01 3466867 3474474 Lele04g0600 04 3626093 3634127 hybridization