Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0578 ATGCACCAAAGTCGAATATTTGTTCGTTTTCGGAAATTAAACGGAATGCCTGGTTTTAACTATGCACCATTTGGCTCTTTGAATGAGTTGGAATCTCTTCGTTTCTGATGGCTTGGTATCAGTAATCACAGAAATTTCATTGTTGGTACAGAAAACATGGAGCTTTCCCCCTCCTCCGCTGTGATCGCACGGCAAACTTGGGAGCTTGAGAACAACATCATCCCCATGGACACTCCCACTACCAGCGCCGATCAAGCCTCCGACGCCATCTTCTACTACGACGAGGCTGCCCAGACCGAATTCCAGAGAAGCAAGCCTTGGGTTAACGACCCCCACTACTTCAAGCGCGTTAAGATCTCCGCCCTTGCCCTTCTCAAGATGGTTGTCCATGCTCGCTCTGGTGGCACTATCGAAGTCATGGGGCTCATGCAGGGCAAGACTGATGGTGACGCCATCATCGTCATGGACGCCTTCGCTTTGCCTGTTGAAGGCACCGAGACTCGTGTCAATGCCCAGGCCGATGCCTACGAATATATGGTTGATTATTCTCAGACTAACAAGCAGTACTATGCATTGGATATCACTTACTCCAAGTCTTCTCTTGATTCACATCTCTTGGATCTTCTATGGAACAAATATTGGGTGAATACACTTTCATCCTCTCCGTTATTGGGTAATGGAGACTATGTCGCTGGACAAATATCAGATCTAGGTACTGTTGTGTTGCACACTATTGCTTAG 741 0.4737 MHQSRIFVRFRKLNGMPGFNYAPFGSLNELESLRFXWLGISNHRNFIVGTENMELSPSSAVIARQTWELENNIIPMDTPTTSADQASDAIFYYDEAAQTEFQRSKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQYYALDITYSKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLGTVVLHTIA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0578 246 FunFam COP9 signalosome complex subunit 5 55 188 - -
Lele01g0578 246 SMART pad1_6 116 234 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele01g0578 246 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 114 188 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele01g0578 246 Gene3D Cytidine Deaminase, domain 2 185 225 - -
Lele01g0578 246 Gene3D Cytidine Deaminase, domain 2 56 184 - -
Lele01g0578 246 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 108 186 - -
Lele01g0578 246 ProSiteProfiles MPN domain profile. 117 246 IPR037518 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0578 Lele-ChrLele01 3408264 3411256 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0578 01 3408264 3411256 Lele03g0582 03 3440242 3443449 hybridization
Lele01g0578 01 3408264 3411256 Lele04g0591 04 3566994 3570484 hybridization