Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0591 ATGGAGCTTTCCCCCTCCTCTGCTGTGATCGCACAGCAAACTTGGGAGCTAGAGAACAATATCATCCCCATGGACACTCCCACTACCAGCGCCGACCAAGCCTCCGACGCCATCTTCTACTACGACGAGGCCGCCCAGACCGAATTCCAGAGAAGCAAGCCTTGGGTTAACGACCCCCACTTCTTCAAGCGCGTTAAGATCTCCGCTCTTGCCCTTCTCAAGATGGTTGTCCATGCTCGCTCTGGTGGCACTATCGAAGTCATGGGGCTCATGCAGGGCAAGACCGATGGCGATGCCATCATCGTCATGGACGCCTTCGCTTTGCCCGTTGAAGGCACCGAGACTCGTGTCAATGCCCAGGCCGATGCCTACGAATATATGGTTGATTATTCTCAGACTAACAAGCAGAATGAAGTTCTAAGGATTCCATGGAAAATGGGGAAACCCTATTCCATGGCTGGGCGTCTGGAAAATGTTGTTGGATGGTACCATTCCCACCCTGGACATACCCAGAAGTACTATGCGTTGGATATCACTTACTTTAAGGCTTCTCTTGATTCACATCTCTTGGATCTTCTATGGAACAAATATTGGGTGAATACACTTTCATCTTCTCCATTATTGGGTAATGGAGACTATGTCGCTGGACAAATATCGGATCTAGTCTTGGAAACTAGACACCAATTTGATAGATGTAAACTCAATCAGACCCTGCTTCCAAGAGAAGGGAGCTGTTATAAGTACCAAAGTACTGCACCTTCTAAAGGGATACATTTACACCATGAAGAGTCTCCACTTGCTAAGATTACTCGTGACAGTGCAAAAATTACTGTGGAGCAAGTTCATGGTTTGATGTCACAGGTCATCAAGGACATCCTCTTCAACTCTGTTCGTCAAGCAAAAAAATCCGTTGCTGAAGCATCTGGTCCCGAACCCATGATTGAAAGCTGA 951 0.4753 MELSPSSAVIAQQTWELENNIIPMDTPTTSADQASDAIFYYDEAAQTEFQRSKPWVNDPHFFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQNEVLRIPWKMGKPYSMAGRLENVVGWYHSHPGHTQKYYALDITYFKASLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLVLETRHQFDRCKLNQTLLPREGSCYKYQSTAPSKGIHLHHEESPLAKITRDSAKITVEQVHGLMSQVIKDILFNSVRQAKKSVAEASGPEPMIES 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0591 316 ProSiteProfiles MPN domain profile. 65 222 IPR037518 -
Lele04g0591 316 SUPERFAMILY JAB1/MPN domain 64 182 - -
Lele04g0591 316 Gene3D Cytidine Deaminase, domain 2 4 169 - -
Lele04g0591 316 Gene3D Cytidine Deaminase, domain 2 170 209 - -
Lele04g0591 316 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 172 306 - -
Lele04g0591 316 SMART pad1_6 64 218 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele04g0591 316 FunFam COP9 signalosome complex subunit 5 3 171 - -
Lele04g0591 316 Pfam Cop9 signalosome subunit 5 C-terminal domain 203 295 IPR040961 -
Lele04g0591 316 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 62 172 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0591 Lele-ChrLele04 3566994 3570484 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0578 01 3408264 3411256 Lele04g0591 04 3566994 3570484 hybridization
Lele02g0572 02 3429866 3433376 Lele04g0591 04 3566994 3570484 hybridization