Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0529 ATGGTGAATCCTATGGTAGAACGAGCTACGAGCGACATGCTCATTGGTCCTGATTGGGCGATGAATATCGAGATCTGTGACATGCTGAATAGCGACCCCGGCCAAGCAAAGGATGTTGTTAAAGGTATAAAGAAGCGGATTGGAAGTAAGAATTCAAAAGTTCAACTTCTTGCATTAACTCTACTGGAGACAATCATAAAGAATTGTGGGGACATTGTTCACATGCATGTCGCTGAGAGAGATGTGCTTCATGAGATGGTAAAAATAGCAAAGAAGAAGCCTGATTTTCATGTCAGAGAGAAGATTCTGATTCTTATAGATACTTGGCAAGAAGCTTTTGGAGGACCAAGGGCTAGATACCCGCAGTACTATGCTGCATACCAGGAACTGCTGCGTGCTGGGGCAGTATTCCCTAAGAGATCTGAACAATCTGCACCTGTGTTCACACCGCCACAAATCCAACCACTGTCATCATATCCTCAAAATTTACGCAACTCTGAGGCACGTCAGGATACAGCTGAGTCCTCTACGGAGCCTGAGTTTCCAACTCTGAGTTTGAGCGAAATTCAGAATGCTCGTGGTATTATGGATGTTCTTGCAGAAATGCTCAGTGCCATAGAACCAAGTAACAAAGAAGGTCTTAGGCAGGAGGTTATTGTTGACTTGGTGGAGCAGTGCCGAACCTACAAGCAGAGAGTGGTGCACCTTGTTAATTCAACTTCGGATGAAGAACTGCTATGCCAAGGTCTATCTCTCAATGACGACCTGCAGCGAGTACTAGCAAAGCATGAAGCCATTGCTTCGGGTGTTCCTGTTGCAAATCCAATAGAGAAAGTGAAGTCAGAGCCTGCTGGAGCACTTGTAGATGTTGGTCCTCTGGTTGATAATGGAGATGCTAGCAAACAAACTGATACGAGTTCTAGTGCTGAAGGTGGATCCCAAACGTTGAATCAATTATTGCTTCCTGCTCCTCCCACTTCTAATGGCTCAGCTCTTCATGCTAAGGCTGATCCCAAAATGGACTTGCTCAGTGGTGATGATTATACCTCGCCAAAAGCAGATACTTCACTTGCTCTTGTTTCTGTGGGAGAACAGCAACCAGCAAATCCTGTGTCTCAGCAGAATGCCCTTGTTCTTTTTGATATGTTTTCAAATGGAAACAGTGAACTGACTTCCACTCATCCAACCCAGCCAACTAATGTTGGTGGACAAACCAGTCCATTAGCCCCCCATGGTCAACAACAGCAGACAGTCATACCTACACAAGGGGCATTTTATGGCAATGGAAGCGTGCCTAATGTGGGGTCACCTCGTTTTGAGCAACCACTTTACTCACAAAGCACAGGTCCTGCCTGGAATGGTCAGGTTGCCCAGCAGCAGCAGCAGGCATCAGCTTCACCAGTTTATGGTGCGCAAAGCAGTGAATCATTGCCACCGCCCCCGTGGGAAGCTCAACCAACAGATAACGGTAGTCCAGTAGCGGGCGGCAATTATCCCCCATCACTGCAAGTCACTCAAGTGGTTATGACGCATGTTCAGCATACTCAGGGAATTCCGGCATTGGGGAATGACCAAGTTGGCATGTATATGCAGCCGAATGCTGTTCACAGCAATCCAATGGGCTTGCACCCTCAGCATATTCAGGGTCGCGCAGGACCCTATATGGGTATGGTTTCTCCTCAATTGCAAGCTGCTCCTGTGGCTTCTATGTATCCTCAACAGATGTATGGCAACCAATTCACGGGATATGGCTTCGGTCAGCAACAAGGGGTCCCATACCTCGAGCAGCAAATGTATGGACTATCTGTTAGAGATGATAATGGTTTGAGAAACCCCTACCAGGTTTTTTCCTCATCTTACTTGCCACCTGGCAAACCTTCCAAGCCAGAGGACAAGTTATTTGGGGATCTTGTTGACATGGCAAAAGTCAAATCAAAACCCACTCCAGGTCGAGCTGGTAGCATGTCCGATGACCTTCTTTGCTCTGCTTATTTGATATCCCTTATCAAGGGACCATCAGAGACTCCTTATGAGGGGGGTGTTTTCCAGCTTGCTTTTGCTGTTCCGGAGCAGTATGCATTACAACCTCCTCAAGTGCGCCCAGCTTGGACACTTCAATCTGTTTGTAGAGCTATAATAGCTCTGATGGCCCATCCAGCACCTGACAGTCCATTGAATTGTGATTCAGGTAATCTTCTGCGTTCAGGCGATGTTAAGAGGGTACCAGTCCATGGCCAGAATGTACACTAG 2250 0.4702 MVNPMVERATSDMLIGPDWAMNIEICDMLNSDPGQAKDVVKGIKKRIGSKNSKVQLLALTLLETIIKNCGDIVHMHVAERDVLHEMVKIAKKKPDFHVREKILILIDTWQEAFGGPRARYPQYYAAYQELLRAGAVFPKRSEQSAPVFTPPQIQPLSSYPQNLRNSEARQDTAESSTEPEFPTLSLSEIQNARGIMDVLAEMLSAIEPSNKEGLRQEVIVDLVEQCRTYKQRVVHLVNSTSDEELLCQGLSLNDDLQRVLAKHEAIASGVPVANPIEKVKSEPAGALVDVGPLVDNGDASKQTDTSSSAEGGSQTLNQLLLPAPPTSNGSALHAKADPKMDLLSGDDYTSPKADTSLALVSVGEQQPANPVSQQNALVLFDMFSNGNSELTSTHPTQPTNVGGQTSPLAPHGQQQQTVIPTQGAFYGNGSVPNVGSPRFEQPLYSQSTGPAWNGQVAQQQQQASASPVYGAQSSESLPPPPWEAQPTDNGSPVAGGNYPPSLQVTQVVMTHVQHTQGIPALGNDQVGMYMQPNAVHSNPMGLHPQHIQGRAGPYMGMVSPQLQAAPVASMYPQQMYGNQFTGYGFGQQQGVPYLEQQMYGLSVRDDNGLRNPYQVFSSSYLPPGKPSKPEDKLFGDLVDMAKVKSKPTPGRAGSMSDDLLCSAYLISLIKGPSETPYEGGVFQLAFAVPEQYALQPPQVRPAWTLQSVCRAIIALMAHPAPDSPLNCDSGNLLRSGDVKRVPVHGQNVH 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0529 749 MobiDBLite consensus disorder prediction 439 473 - -
Lele01g0529 749 ProSiteProfiles VHS domain profile. 9 138 IPR002014 GO:0035091|GO:0043130
Lele01g0529 749 SUPERFAMILY UBC-like 662 735 IPR016135 -
Lele01g0529 749 PANTHER TOM1-LIKE PROTEIN 1 646 IPR044836 GO:0035091|GO:0043130|GO:0043328
Lele01g0529 749 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 628 749 IPR000608 -
Lele01g0529 749 CDD VHS 2 132 - -
Lele01g0529 749 Pfam VHS domain 5 129 IPR002014 GO:0035091|GO:0043130
Lele01g0529 749 CDD GAT_GGA_like_plant 188 266 - -
Lele01g0529 749 Pfam GAT domain 194 268 IPR004152 GO:0035091|GO:0043130
Lele01g0529 749 ProSiteProfiles GAT domain profile. 180 268 IPR004152 GO:0035091|GO:0043130
Lele01g0529 749 SUPERFAMILY ENTH/VHS domain 3 138 IPR008942 -
Lele01g0529 749 MobiDBLite consensus disorder prediction 289 333 - -
Lele01g0529 749 Gene3D - 183 271 IPR038425 -
Lele01g0529 749 MobiDBLite consensus disorder prediction 388 429 - -
Lele01g0529 749 SMART VHS_2 2 134 IPR002014 GO:0035091|GO:0043130
Lele01g0529 749 MobiDBLite consensus disorder prediction 388 498 - -
Lele01g0529 749 MobiDBLite consensus disorder prediction 298 325 - -
Lele01g0529 749 FunFam TOM1-like protein 2 1 148 - -
Lele01g0529 749 Gene3D - 2 135 IPR008942 -
Lele01g0529 749 Gene3D Ubiquitin Conjugating Enzyme 637 700 IPR016135 -
Lele01g0529 749 FunFam TOM1-like protein 2 182 272 - -
Lele01g0529 749 Pfam Ubiquitin-conjugating enzyme 640 700 IPR000608 -
Lele01g0529 749 SUPERFAMILY GAT-like domain 139 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0529 Lele-ChrLele01 3163306 3172824 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0529 01 3163306 3172824 Lele01g0529 01 3163306 3172824 ECH
Lele01g0529 01 3163306 3172824 Lele03g0537 03 3191295 3195879 hybridization
Lele01g0529 01 3163306 3172824 Lele04g0540 04 3263357 3276383 hybridization