Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0522 ATGCTTATAACCGATATAGAAGGAAATGTCCCACATGATTTTCAAGAGGGTGTCTATGTTAGAAATGGTCCTCATTCTTGTCTCTTGTTGAACTATTGCACTTTTGAAGGTCCAAATCCACTATTTGGAGGATTAAAAACGACCAAGTCTATCTTTGGAAGTTCAAGTCACATTTGGGTTGAAGGAGAAGGAATGCTTCATGCTTTGTATTTTAGGAAAGCAAGCCATGGGAACTGGACGGTAGTCTACAAAAACAGATTTGTAGAAACTGAAACTTACAAGATAGAGAAGCAAAGAAACAAGCCTTCGTTTCTGCCGGCCATAGTTTCTGCCGGCCATAGAAGGCGATTCACCTGCCATTTTGTCTGCCTATCTCCTAAACTGGGAGAGCTAGTTATAATGGGGGTTTCTCCAACTAAGCCTTTTGCTACAGTTGGAATCATCTCTGATGATGGAAAGAAATTGATTCATAAAGTGGATATCAAATTGAATAGGTGTAGTCTTTGCCATGAAATAGGCATTACACAACGATTAATAGAGTACAATAAAGAGGGATATGCAAGAATAGGGGTAATGCCACGCTATGGTGATGCCAACTCAATCCAATGGTTTGAGGTGAAACCTAATTGCACAGTTCACATAATCAATTCTTTTGAGGATGCCCATGAGGTAACTGAGATTTCCAAAGCAGCTCTTGATTCAGTAATTCCTCGGCTTGACACTAGTTTGAATCCGTTCGAGGCATTCTCTCGTTGTTATGAGTGGAGATTGAATCTGCAAAATGGGGAAGTTAAGGAGAAGGATCTCAGTGGAACTAAAGTAATAAATATGGATTTTCCTACGATTGATGCAAATTTTGTAGGTATTAAGAATAGATATGGATACACTCAAGTGGTTGATCCTGCAGCTAGCTCCATTGCAGTTGATGTTGTTAAGCAGAATAACAAACAGCACGAAGAGCCTATAAAGGTGGAATACCACATGTTTGCGAAGAATGTATTTTGCACAGGAGCATCCTTTGTCCCTAAAAGTGATGGGGTTGAAGAAGATGATGGTTGGATCATCACTTTTATTCACAACGAAGAAACTGACATATCTCAAGTTCTTATAATTGACACAAGAAAGTTCTCAGGAGAAGCAGTCGCCAAAATTACGATGCCCCAACGAGTTCCATATGGCTTTCATGGAGCTTTCATGCCAATTTCCTTGGAAGCTTAA 1218 0.3974 MLITDIEGNVPHDFQEGVYVRNGPHSCLLLNYCTFEGPNPLFGGLKTTKSIFGSSSHIWVEGEGMLHALYFRKASHGNWTVVYKNRFVETETYKIEKQRNKPSFLPAIVSAGHRRRFTCHFVCLSPKLGELVIMGVSPTKPFATVGIISDDGKKLIHKVDIKLNRCSLCHEIGITQRLIEYNKEGYARIGVMPRYGDANSIQWFEVKPNCTVHIINSFEDAHEVTEISKAALDSVIPRLDTSLNPFEAFSRCYEWRLNLQNGEVKEKDLSGTKVINMDFPTIDANFVGIKNRYGYTQVVDPAASSIAVDVVKQNNKQHEEPIKVEYHMFAKNVFCTGASFVPKSDGVEEDDGWIITFIHNEETDISQVLIIDTRKFSGEAVAKITMPQRVPYGFHGAFMPISLEA 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0522 405 Pfam Retinal pigment epithelial membrane protein 6 104 IPR004294 GO:0016702
Lele01g0522 405 Pfam Retinal pigment epithelial membrane protein 179 400 IPR004294 GO:0016702
Lele01g0522 405 PANTHER BETA-CAROTENE DIOXYGENASE 6 111 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0522 Lele-ChrLele01 3107211 3109806 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0522 01 3107211 3109806 Lele01g0522 01 3107211 3109806 ECH
Lele01g0522 01 3107211 3109806 Lele03g0531 03 3134410 3137405 hybridization
Lele01g0522 01 3107211 3109806 Lele04g0530 04 3203464 3207171 hybridization