Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0530 ATGGATAACGATCATAAGAGAAAGCTAACTCCATACATGCTCTCTGTTTCTTTTTCTTCCTATTCACCCGCTCGTTCCTTACTTGTGCTGCACGTCTTAACATGGCCGATCCTGGGATCTCTTCCTCGAATCCCTTTGCAAATTGATGCACCCAAAACCCTGAATAACGCAACAGCTAAAATACTGGACGCTTTGTGGATTCAGTCTTCTAGTTCATTGACCAGCCTCTGTTTCCATCTCAGGCCCGAATCCACTATTTGGAGGATTGAAAACAACCAAACTATATTTGAAAGGTCAAATCACATTTGGGTTGAAGGAGAAGGAATGCTTCATGCTTTGTATTTTAAGAAAGCAAGTGAAGGAAACTGGACGGTCATCTACAAAAACAGATATGTAGAAACAGAAACTTACAAGATAGAGAAACAAAGACACAAGCCTTCCTTTCTGCCCGCCGCAGATGGTGATTCACCTGCCATTCTGTCTGCCTATCTCCTAAACTGGAAAGCTCCAACTAGAGGAGAGCTAATTATAATGGTGGTGTCTCCAACTAAGCCTTTTGCTACACTTGGAATCATCTCGGATGATGGAAAGAAATTGATTCATGAAGTGGATATCAAATTGAATAGGTGCAGTCTTTGCCATGAAATAGGCATTACGCAACGATTAATAGAGTACAACAATGAGGGATATGCAAGAATAGGAGTAATGCCACGTTATGGCGATGCCAGACTTGATGTTGTTAAGCAGAATAACAAACAGCATGAAGAACCTATAAAGGTGGAATACCACATGTTTGAGAAGAATGTATTTTCCACAGGAGCATCCTTTGTCCCTAAAAGTGATGGGGTTGAAGAAGATGACTGTTGGATCCTCATTTTTATTCACAACGAAGATACTGACATATCTCAAGTAAGGAGTTAA 921 0.4072 MDNDHKRKLTPYMLSVSFSSYSPARSLLVLHVLTWPILGSLPRIPLQIDAPKTLNNATAKILDALWIQSSSSLTSLCFHLRPESTIWRIENNQTIFERSNHIWVEGEGMLHALYFKKASEGNWTVIYKNRYVETETYKIEKQRHKPSFLPAADGDSPAILSAYLLNWKAPTRGELIIMVVSPTKPFATLGIISDDGKKLIHEVDIKLNRCSLCHEIGITQRLIEYNNEGYARIGVMPRYGDARLDVVKQNNKQHEEPIKVEYHMFEKNVFSTGASFVPKSDGVEEDDCWILIFIHNEDTDISQVRS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0530 306 Pfam Retinal pigment epithelial membrane protein 97 148 IPR004294 GO:0016702
Lele04g0530 306 PANTHER BETA-CAROTENE DIOXYGENASE 88 155 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0530 Lele-ChrLele04 3203464 3207171 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0530 04 3203464 3207171 Lele04g0530 04 3203464 3207171 ECH
Lele01g0522 01 3107211 3109806 Lele04g0530 04 3203464 3207171 hybridization
Lele02g0508 02 3070440 3074623 Lele04g0530 04 3203464 3207171 hybridization