Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0531 ATGGCAGCTTCATATACAGCATTCACAGTGAAATGCTCTGTTCAGAAAAAACACAGCTCTGTCTCCCACAATTTTCATCACCCCACTATTCCATTATCCTCTCTTTTCAAGCCGATCCTACTATCTCTCCCTCAAATCCCTTTGCAAATTGATGTACCCAAAACCCTGAGCAACGCAACAGCTAAAATACTGGAGGCTTTTGTGGATTCAGTGTTTGAGTTCATTGACCAGCCACTGCTTCCATCTCAGAGTAACTTCGCTCCTGTGGAGCAGTTGGAGGAAGCCATGCTTATCACAGACATAGAAGGAAATGTCCCACATGATTTTCAAGAGGGTGTCTATGTTAGAAATGGTCCAAATCCACTATTTGGAGGATTAAAAACGACCAAGTCTATCCTTGGAAGTTCAAGTCACATTTGGGTTGAAGGAGAAGGAATGCTTCATGCTTTGTATTTTAAGAAAGCAAGCCATGGGAACTGGACGGTAGTCTACAAAAACAGATTTGTAGAAACTGAAACTTACAAGATAGAGAAGCAAAGAAACAAGCCTTCGTTTCTGCCGGCCATAGAAGGCGATTCACCTGCAATTTTGTCTGCCTATCTCCTAAACTGGCTAAGATTTGGAAAAGTGAACAAATACATCAGCAACACCAACGTGTTTGAGCATTCAGGGAAGTTTTACTCCACTGCTGAAAATCACATCCCACAAGAGATTGACATCATCACCCTCAAAACCTTAAGAAATTGGGATTTCAGTGGATCGTGGAATCAACCTTTTACAAGCCACCCAAAGAAAGCTCCAACTACAGGAGAGCTAGTTATAATGGGGGTGTCTCCAACTAAGCCTTTTGCTACAGTTGGAATCATCTCTGATGATGGAAAGAAATTGATTCATAAAGTGGATATCAAATTGAATAGGTGTAGTCTTTGCCACGAAATAGGCATTACACAACGGTTCAATGTGATCATGGATTTCCCACTAACCTTGGATCTAAACAGACTTATTAGAGGAGGCCCATTAATAGAGTACAATAAAGAGGGATATGCAAGAATAGGGGTAGTGCCACGCTATGGTGATGCCAACTCAATGCAATGGTTTGAGGTGAAACCTAATTGCACATTTCACATAATCAATTCTTTTGAGGATGCCCATGAGGTTGTAGTGTGGGGATGCAGAGCTCTTGATTCAGTAATTCCTCGGCTTGACCCTCGTTTGAATCCGTTCGAGGCATTCTCTCGTTGTTATGAGTGGAGATTGAATCTGCAAAATGGAGAAGTTAAGGAGAAGGATCTCGGTGGAACTAAAGTACTAAATATGGATTTTCCTACGATTAATGCAAATTTTATAGGTATTAAGAATAGATATGGATACACTCAAGTGGTTGATCCTGCAGCTAGCTCCATTGCAGGAGTGCCTAAATATGGAGGTCTAGCCAAGATCTACTTTGAAAAACCATGCATGGATTTATCTACGAATAACAAACAGCATGAAGAGCCTATAAAGGTGGAATACCACATGTTTGAGAAGAATGTATTTTGCACAGGAGCATCCTTTGTCCCTAAAAGGGATGGGGTTGAAGAAGATGATGGTTGGATCATCACTTTTATTCACAACGAAGAAACTGACATATCTCAAGTTCATATTATTGACACAAGAAAGTTCTCAGGAGAAGCAGTCGCCAAAATTACGATGCCCCAACGAGTTCCATATGGCTTTCATGGAGCTTTCATGCCAATTTCCTTGGAAGCTTATTAG 1755 0.4103 MAASYTAFTVKCSVQKKHSSVSHNFHHPTIPLSSLFKPILLSLPQIPLQIDVPKTLSNATAKILEAFVDSVFEFIDQPLLPSQSNFAPVEQLEEAMLITDIEGNVPHDFQEGVYVRNGPNPLFGGLKTTKSILGSSSHIWVEGEGMLHALYFKKASHGNWTVVYKNRFVETETYKIEKQRNKPSFLPAIEGDSPAILSAYLLNWLRFGKVNKYISNTNVFEHSGKFYSTAENHIPQEIDIITLKTLRNWDFSGSWNQPFTSHPKKAPTTGELVIMGVSPTKPFATVGIISDDGKKLIHKVDIKLNRCSLCHEIGITQRFNVIMDFPLTLDLNRLIRGGPLIEYNKEGYARIGVVPRYGDANSMQWFEVKPNCTFHIINSFEDAHEVVVWGCRALDSVIPRLDPRLNPFEAFSRCYEWRLNLQNGEVKEKDLGGTKVLNMDFPTINANFIGIKNRYGYTQVVDPAASSIAGVPKYGGLAKIYFEKPCMDLSTNNKQHEEPIKVEYHMFEKNVFCTGASFVPKRDGVEEDDGWIITFIHNEETDISQVHIIDTRKFSGEAVAKITMPQRVPYGFHGAFMPISLEAY 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0531 584 PANTHER BETA-CAROTENE DIOXYGENASE 93 577 IPR004294 GO:0016702
Lele03g0531 584 Pfam Retinal pigment epithelial membrane protein 86 578 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0531 Lele-ChrLele03 3134410 3137405 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0531 03 3134410 3137405 Lele03g0531 03 3134410 3137405 ECH
Lele01g0522 01 3107211 3109806 Lele03g0531 03 3134410 3137405 hybridization
Lele02g0508 02 3070440 3074623 Lele03g0531 03 3134410 3137405 hybridization