Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0518 ATGATAATACATGCTTTTAAATCCTGCACTTTGAGAGTGTTTCTTCGTACTCAACCAAACCTACACCTTCCTCTATCGTCTTCCTCCCTCAGAAATAATTTCATGGCTTTTGCAAACTTCACTACTGCCATCAGAAACCCCATTTCGTGGCCAGCAATGGCGGTTTCTGATGACAACAAAAAGGGTGGCTTTCCATTATTTCCCATTAACAAGGGCCTCTTCAGAACCCAACGCAGTTTTCTACCAGACTTGACTGTTACTAATGTTGTTACTCCATCGCCTCCGGTCGCTCCGCCGCCACTAACGCCGCCCGAGAGATCCGACACCACCGGCACTCGCCAGCATCCTGCATGGACTAGCATCCCGCAAGAGAGATGGGAAGGAGAACTCCATGTTCAAGGACGAATACCATTATGGCTGAAAGGAACGTACCTGAGGAATGGCCCAGGGCTGTGGCACATAGGGGACTACAACTTCAGGCACCTTTTTGACGGCTACGCCACTCTGGTCAAACTTCAGTTCGAGAACGGCCGGTTGATCGCCGGCCACAGCCAAGTGGAATCCCAGGCCTATCAAGCCGCTAAAAATAACCAAAAGCTTTGTTACCGTGAATTCTCCGAGGCCCCCAAGCCTGGTAATTTCTTAGCCTACCTGGGTGAACTCGCTAGTCTGTTCTCAGGCGCTTCGCTCACTGATAACGCAAACACCGGCGTGGTGAAACTCGGCGATGGACGTGTGGTTTGCCTGACGGAGACCCAGAAAGGGTCCATCGTGATAAACCCGAACACGTTGGAGACGGTGGGGAGATTCGATTACAGTGACACGTTAGGGGGTTTGATCCACTCAGCACACCCTATTGTGACCGACAAAGAATTCTTGACGTTACTACCAGACCTGATAAACCCTGGTTATTTGGTGGTGAGAATGGAAGCCGGGTCGAATGAACGGAAGGTGATAGGACGGGTTAATTGTCGGGGCGGGCCAGCACCGGGTTGGGTTCACTCGTTTCCGGTGACTGAGCACTACATTATTGTGCCTGAAATGCCACTGAGATATTGTGCTCAGAATTTGCTGAGAGCTGAACCGACGCCGTTGTACAAGTTTGAGTGGCACCCTGAATCCAAAGCTTTTATGCATGTCATGTGCAGGACTAGTGGAAAGATAGTGGCGAGCGTAGAAGTGCCATTGTTCGTGACGTTCCATTTCATAAATGCGTATGAAGAAGAAGATGAAGATGGGAGAGTGACGGGCATTATCGCCGACTGTTGTGAGCATAGCGCCGACACCTCCATTCTTGATAGGCTCAGGCTACAGAATCTCCGCTCCTTCAACGGCCACGATGTACTGCCGGATGCAAGGGTAGGAAGGTTCAGAATACCTATGGATGGGAGTGAATATGGGACATTAGAGGCAGCGTTGGAGCCGGAGGAGCATGGGAGAGGCATGGACATGTGCAGCTTCAACCCTAATTATTTGGGGAAGAAATACAGATATGCTTATGCATGTGGAGCCAAGCGCCCTTGCAACTTCCCCAACACCCTCACCAAGCTTGATTTCGTGGAGAAGAAGGCGAAGAATTGGTACGAGGAAGGCGCTGTTCCCTCGGAACCCTTCTTCGTGGCTCGACCTGGAGCTACAGATGAAGACGATGGCGTGGTGATGTCCATAGTAAGTGAGAGAAACGGAGACGGATATGCGTTGGTGTTAGATGGTTCCAGCTTTGAAGAGATAGCCAGAGCCAAGTTCCCTTATGGACTGCCCTACGGATTGCATGGATGCTGGGTTCCTAAACACTGA 1797 0.507 MIIHAFKSCTLRVFLRTQPNLHLPLSSSSLRNNFMAFANFTTAIRNPISWPAMAVSDDNKKGGFPLFPINKGLFRTQRSFLPDLTVTNVVTPSPPVAPPPLTPPERSDTTGTRQHPAWTSIPQERWEGELHVQGRIPLWLKGTYLRNGPGLWHIGDYNFRHLFDGYATLVKLQFENGRLIAGHSQVESQAYQAAKNNQKLCYREFSEAPKPGNFLAYLGELASLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVINPNTLETVGRFDYSDTLGGLIHSAHPIVTDKEFLTLLPDLINPGYLVVRMEAGSNERKVIGRVNCRGGPAPGWVHSFPVTEHYIIVPEMPLRYCAQNLLRAEPTPLYKFEWHPESKAFMHVMCRTSGKIVASVEVPLFVTFHFINAYEEEDEDGRVTGIIADCCEHSADTSILDRLRLQNLRSFNGHDVLPDARVGRFRIPMDGSEYGTLEAALEPEEHGRGMDMCSFNPNYLGKKYRYAYACGAKRPCNFPNTLTKLDFVEKKAKNWYEEGAVPSEPFFVARPGATDEDDGVVMSIVSERNGDGYALVLDGSSFEEIARAKFPYGLPYGLHGCWVPKH 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0518 598 PANTHER BETA-CAROTENE DIOXYGENASE 122 596 IPR004294 GO:0016702
Lele01g0518 598 MobiDBLite consensus disorder prediction 91 116 - -
Lele01g0518 598 Pfam Retinal pigment epithelial membrane protein 123 596 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0518 Lele-ChrLele01 3072215 3076931 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0518 01 3072215 3076931 Lele01g0518 01 3072215 3076931 ECH
Lele01g0518 01 3072215 3076931 Lele03g0527 03 3100334 3103111 hybridization
Lele01g0518 01 3072215 3076931 Lele04g0524 04 3161611 3164435 hybridization