Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0524 ATGGCTTCCGCAAACTTCACTTCTGCCATCAGAAACTCCATTTCATGGCCAACAATGGCCGTTTCTGATGACAGCAAAAAGGGTGGCCTTCCATTATTTCCCAGTAACAAGGGCTTCTTCAGAAGCCAACGCAGTTCTCTACCAGACTTGACTGTTACTAATGTCGCCGCTCCATCGCCTCCAGTTGCTCCTCCGCCACTGATGCCGTCTGAGAGATCGGAGACCACCGGCGCTCGCCAGCATCCTGCATGGACTAGCATCTCCCAAGAGAGATGGGAAGGAGAACTCCATGTTCAAGGACGAATACCATTATGGCTGAAAGGAACGTACCTGAGGAATGGTCCAGGGTTGTGGGACATAGGGGACTACAACTTCAGGCACCTTTTTGACGGATACGCCACTCTGGTCATGCTTCAGTTCGAGAATGGCCGGTTGATCGCCGGCCACCGCCAAGTGGAATCCCAGGCCTATCGAGCCGCTAAAAAGAACCAAAAGCTTTGTTACCGGGAATTCTCCGAAGCCCCCAAGCCTGCTAATTTCTTAGCCTACGCGGGTGAGCTCGTTAATCTGTTCTCAGGCGCCTCGCTCACTGATAACGCAAACACCGGCGTCGTGAAGCTCGGCGACGGACGTGTGGTTTGCCTAACGGAGACCCAGAAAGGGTCCATCGTGATAGACCCGAACACATTGGATACAGTGGGGAGATTCGATTACAGTGACACGTTAGGGGGTTTGATCCACTCAGCACACCCGATCGTGACCGATGAAGAATTCTTGACGTTATTACCGGACCTGATAAACCCTGGGTATTTAGTGGTGAGGATGAAAGCCGGGTCGAATGAACGGAAGGTGATAGGACGGGTTAATTGTCGGGGCGGGCCGGCACCTGGTTGGGTCCACTCGTTTCCGGTGACCGAGCACTACGTTATCGTGCCTGAAATGCCACTGAGATACTGTGCGCAGAATTTGCTGAGAGCTGAACCGACGCCGTTGTACAAGTTTGAGTGGCACCCTGAATCCAAAGCTTTTATGCATGTCATGTGCAGGACAAGTGGAAAGATATGCATATTGATGATGGTGATGATAATTTGGAAGGTGGCGAGCGTAGAAGTGCCATTGTTCGTGACGTTCCATTTCATAAATGCATATGAAGAAGAAGATGAAGATGGGAGAGTGACGGGTATTATCGCCGACTGTTGTGAGCATAGCGCCGACACCTCCATTCTTGATAGGCTCAGGCTTCAGAACCTCCGCTCCTTCAACGGCCAGGATGTACTGCCGGATGCAAGGGTAGGAAGGTTCAGAATACCTATGGATGGGAGTGAATACGGGACATTAGAGGCAGCGTTGGAGGCAGAGGAGCACGGGAGAGGCATGGACATGTGCAGCTTCAACCCTAATTATTTGGGAAAGAAATACAGGTATGCTTATGCATGTGGAGCCAAGCGCCCTTGTAACTTCCCCAACACCCTCACCAAGCTCGATTTCGTGGAGAAGAAGGCAAAGAATTGGTACGAGGAAGGCGCTGTTCCCTCAGAACCCTACTTCGTGGCTCGACCTGGAGCTGCAGAGGAAGACGATGGCGTGGTGATCTCTATAGTAAGTGAGAGAAATGGAGACGGATATGCGTTGGTGTTGGATGGTTCCAGCTTTGAAGAGATTGCGAGAGCCAAGTTCCCTTATGGACTGCCATATGGATTGCATGGATGCTGGGTTCCTAAACACTGA 1728 0.5145 MASANFTSAIRNSISWPTMAVSDDSKKGGLPLFPSNKGFFRSQRSSLPDLTVTNVAAPSPPVAPPPLMPSERSETTGARQHPAWTSISQERWEGELHVQGRIPLWLKGTYLRNGPGLWDIGDYNFRHLFDGYATLVMLQFENGRLIAGHRQVESQAYRAAKKNQKLCYREFSEAPKPANFLAYAGELVNLFSGASLTDNANTGVVKLGDGRVVCLTETQKGSIVIDPNTLDTVGRFDYSDTLGGLIHSAHPIVTDEEFLTLLPDLINPGYLVVRMKAGSNERKVIGRVNCRGGPAPGWVHSFPVTEHYVIVPEMPLRYCAQNLLRAEPTPLYKFEWHPESKAFMHVMCRTSGKICILMMVMIIWKVASVEVPLFVTFHFINAYEEEDEDGRVTGIIADCCEHSADTSILDRLRLQNLRSFNGQDVLPDARVGRFRIPMDGSEYGTLEAALEAEEHGRGMDMCSFNPNYLGKKYRYAYACGAKRPCNFPNTLTKLDFVEKKAKNWYEEGAVPSEPYFVARPGAAEEDDGVVISIVSERNGDGYALVLDGSSFEEIARAKFPYGLPYGLHGCWVPKH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0524 575 MobiDBLite consensus disorder prediction 56 78 - -
Lele04g0524 575 PANTHER BETA-CAROTENE DIOXYGENASE 86 573 IPR004294 GO:0016702
Lele04g0524 575 Pfam Retinal pigment epithelial membrane protein 88 573 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0524 Lele-ChrLele04 3161611 3164435 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0524 04 3161611 3164435 Lele04g0524 04 3161611 3164435 ECH
Lele01g0518 01 3072215 3076931 Lele04g0524 04 3161611 3164435 hybridization
Lele02g0504 02 3034330 3037152 Lele04g0524 04 3161611 3164435 hybridization