Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0502 ATGGATGACGATAGAATACGCGAGAGGGAGAGGCATCAGATCGAGCAGATTCGCCAGCTCGATGATGAAGAATTGCAGGTTGAGGAAGTTGATAACCTAGAAGACGATAGAGTGCAAGTGGTAATGGGCGACGATAGAATACTCGAGAGGGAGAGGCTTCAGATCGAGCAAATTCGCCAGCTCGACCTCGAAGAATTGCAGGTTGAAGAAGTCGATGACCTCCGAGACTCATCCGACGAGGACGCCAACGGCCGTACTGGCCATGCTAGGCCTGCCGCATACGACGATTTCACCTTCGATACGTGCATAACGTCTTTACATACGTATCTGGGTGAGGTTGAGGACACACACCACAGGACTGCTTTCTTGGACGGTGGTGCTTGCTTAAGCCTCCCACTTTTCTATCTTGAAGGAGTTGTACTCTTTCCGGGGGCTACTCTTCCCCTGAGAGTCATACAACCCAATTTTGTTGCCGCCATTGATCGAGCACTGAGCCAACTTGATGTTCCTTACACTATTGGTGTGATTAGAGTTCAGAGGGATACTGAAAATCGTAGGATAAAATTGGCAAGAATTGGAACAACTGCAGAGATTCGACAATACAGGCGTCTAGAGGATGGTTCGTTGAATGTGGTTACCCGTGGACAACAGCGATTTCAACTTAAACGCCGTTGGTTTGATGTGGAAGGAGTGCCTTGTGGAGAGATTCAAATAATTGAGGAAGATCTATCATCAAGAACTCCCAAAGACGCTTTAGTAAAATTAGCTCCATTGCGTAATCTACCTCGTAACCGTGGCGTCTCACATACAGCTTCAAATTTTTCTTGCACTAAATTGCATGGTTCCAAAAATGGGGACGGTGATTCAGAAGAGAGCTTCGAGAGCTTTGAGGATGAACTTTCACCAACGGAAAGGAGAATCAACCAATCACTCATTGGTTCTGGTCATGAGCATGATATTATGGATGAATCATCTAACAATGATTATGAAGAATGCATGTATGAGCCTGATCAGGAGAATAGATATAGCCTAAATGACTCTGACATGACGAGGTCATTGCTCTCTGACCGTGGCAAACAAGCTGTAGATATAGACTTGATTGGTGGCAGCTGTTCCACTTCAGGTTCAGGCAAGCAATCGTGCAAAAATGAACGGTGTAAAAGTACAAGTGCCAACTTCTCTCATGGAATTCCAAGAGCATTCTGGCCCCATTGGGTATACCGAATGTTTGACTCCTATTGCCTTGCACAGAGGGCAGCAGATTTATGGAGGAATGTGGTTGGGACACCAAGCATGGATGGTCTTGTGAAGAAGCCTGATGTTTTATCCTTTTATATTGCCAGTAAAATACCTGTGTCCGAATCTACAAGGCAGGAGCTTTTGGAGATAGATGGAATCTCATATAGATTGCGTAGGGAGATTGAATTACTTGAGCGTGTTAATCTTGTTCGATGTAGGAACTGCCAGACTATCATTGCAAGGCGGAGTGATATGCTGGTGATGTCTAGGGAGGGTCCTCTGGGTGCTTATGTTAATCCAGGTGGTTATGTACATGAGGTCATGACTCTGCACAACGCAAGTGGCTTAGCACTTGTTGGGCGAGCATTTACACAGTATAGTTGGTTTCCGGGCTATGCATGGACAATTGCCAACTGTGCTACATGTGAAAGCCAAATGGGGTGGCTTTTTACAGCAACGAACAAAAAACTTAGACCCAGATCATTTTGGGCGATACGCAGTAGTCAAGTTGCGGAAGAGATGCGCAAAAATTGTGATTAA 1779 0.4547 MDDDRIRERERHQIEQIRQLDDEELQVEEVDNLEDDRVQVVMGDDRILERERLQIEQIRQLDLEELQVEEVDDLRDSSDEDANGRTGHARPAAYDDFTFDTCITSLHTYLGEVEDTHHRTAFLDGGACLSLPLFYLEGVVLFPGATLPLRVIQPNFVAAIDRALSQLDVPYTIGVIRVQRDTENRRIKLARIGTTAEIRQYRRLEDGSLNVVTRGQQRFQLKRRWFDVEGVPCGEIQIIEEDLSSRTPKDALVKLAPLRNLPRNRGVSHTASNFSCTKLHGSKNGDGDSEESFESFEDELSPTERRINQSLIGSGHEHDIMDESSNNDYEECMYEPDQENRYSLNDSDMTRSLLSDRGKQAVDIDLIGGSCSTSGSGKQSCKNERCKSTSANFSHGIPRAFWPHWVYRMFDSYCLAQRAADLWRNVVGTPSMDGLVKKPDVLSFYIASKIPVSESTRQELLEIDGISYRLRREIELLERVNLVRCRNCQTIIARRSDMLVMSREGPLGAYVNPGGYVHEVMTLHNASGLALVGRAFTQYSWFPGYAWTIANCATCESQMGWLFTATNKKLRPRSFWAIRSSQVAEEMRKNCD 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0502 592 FunFam Lon protease homolog 411 475 - -
Lele01g0502 592 Gene3D - 411 476 - -
Lele01g0502 592 SMART lon_5 130 479 IPR003111 -
Lele01g0502 592 FunFam ATP-dependent protease La domain-containing protein 111 239 - -
Lele01g0502 592 ProSiteProfiles CULT domain profile. 480 587 IPR034750 -
Lele01g0502 592 Pfam ATP-dependent protease La (LON) substrate-binding domain 131 479 IPR003111 -
Lele01g0502 592 MobiDBLite consensus disorder prediction 278 301 - -
Lele01g0502 592 SUPERFAMILY PUA domain-like 130 478 IPR015947 -
Lele01g0502 592 FunFam Blast:Protein cereblon homolog 476 592 - -
Lele01g0502 592 Gene3D Peptide methionine sulfoxide reductase. 477 592 - -
Lele01g0502 592 PANTHER CEREBLON 84 580 - -
Lele01g0502 592 CDD CRBN_C_like 483 583 IPR034750 -
Lele01g0502 592 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 483 582 IPR004910 -
Lele01g0502 592 Gene3D - 118 239 IPR046336 -
Lele01g0502 592 ProSiteProfiles Lon N-terminal domain profile. 131 479 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0502 Lele-ChrLele01 2977418 2981429 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0502 01 2977418 2981429 Lele01g0502 01 2977418 2981429 ECH
Lele01g0502 01 2977418 2981429 Lele03g0511 03 2998715 3002722 hybridization
Lele01g0502 01 2977418 2981429 Lele04g0507 04 3063126 3067252 hybridization