Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0507 ATGGATGACGATAGAATTCGCGAGAGGGAGAGGCATCAGATCGAGCAGATTCGCCAGCTCGATCACGAAGAATTGCAGGTCGAGGAAGTTGATGACCTAGAAGACGATGGAATGCCAGTGGTAATGGGCGACGATAGAATACTTGAGAGGGAGAGGCTTCAGATCGAGCAAATTCGCCAGCTCGACCTCGAAGAATTGCAGGTTGAGGAAGTAGATGACCTCCGAGACTCATCCGACGAGGACACCAACGGCCGTACTGGCCATGCTAGGCCTGCCTCATCCGATGATTTCACCTTCGATACGTCCTTAACGTCTTTACACACATATCTGGGTGAGGTTGAGGACACACACCACAGGACTGCTTTCTTGGACGGTGGTGCTCGTTTAAGCCTCCCACTCTTCTATCTTGAAGGAGTTGTACTCTTCCCCGGGGCTACTCTTCCCCTGAGAGTTATACAACCCAATTTTGTTGCTGCTGTTGATCGAGCACTGAGCCAAGTTGATGTTCCTTACACAATTGGTGTGATTAGAGTTCATAGGGATACTGAAAATCGTAGGACAAAATTGGCAAGAATTGGAACAACTGCAGAGATTCGACAATACAGGCGTCTAGAGGATGGTTCACTGAATGTGGTTACCCGTGGACAACAGCGATTTCAACTAAAACGCCGTTCATTTGATGTGGAAGGAGTGCCTTGCGGAGAGATTCAAATAATTGAGGAAGATCTACCATCAAGAACTCCCAAAGATGCTTTAGTAAAATTAGCTCCATTGAGTAATCTACCTCGTAACCGTGGCATCTCACATACAGCTTCAAATTTTTCTTGCACTAAATTGCATGGTTCCAAAAATGGGGACGGTGATTCAGATGAGAGCTTCGAGAGCTTTGAGGATGAACTTTCACCAACGGAAAGGAGAATCCACCAATCACTCGTTGGTTCTGGTCATGAGCATGATATTATGGATGAATCATCTAGCAGCGATGATGAAGAATGCCTGTATGAGCCTGATCAGGAAATTAGATATAATCTAAATGACTCTGACATGACGAGGTCATTGCTCTCTGATGGTGGCAAAGAAGCTGTAAATATAGACTTGATTGGTGCCAGCTGTTCCACTTCAGGTTCAGGCATGCAATCCTGCAAAAGTGAAGCGTGTAAAAGTACAAGTGCCAACTTCTCTCATGGAATTCCTAGAGCATTCTGGCCCCATTGGGTATACCAAATGTTTGATTCCTATTGCCTTGCACAGAGGGCAGCAGATTTGTGGAGGAATGTGGTTGGGACACCAAGCATGGATGGTCTTGTGAAGAAGCCTGACGTTTTATCATTTTATATTGCCAGTAAAATACCTGTGTCCGAATCTACGAGGCAGGAGCTTTTGGAGATAGATGGAATCTCATATAGATTGCGTAGGGAGATTGAATTATTAGAGTGTGTTAATCTTGTTCGATGTAGGAACTGCCAGACTATCATTGCGAGGCGGAGTGATATGTTGGTGATGTCTAGGGAGGGTCCTCTTGGTGCTTATGTTAATCCAGGTGGTTATGTGCATGAGGTCATGACTCTGCACAACGCATGTGGCTTAGCACTTGTTGGGCGAGCATATACACAGTACAGTTGGTTTCCTGGCTATGCATGGACAATTGCCAACTGTGCTACATGTGAAAGCCAAATGGGGTGGCTTTTTACAGCAACGAACAGAAAAATGAAACCCAGATCATTTTGGGCGATACGCAGTAGTCAAGTTGCGGAAGAGATGCGCTAA 1767 0.4567 MDDDRIRERERHQIEQIRQLDHEELQVEEVDDLEDDGMPVVMGDDRILERERLQIEQIRQLDLEELQVEEVDDLRDSSDEDTNGRTGHARPASSDDFTFDTSLTSLHTYLGEVEDTHHRTAFLDGGARLSLPLFYLEGVVLFPGATLPLRVIQPNFVAAVDRALSQVDVPYTIGVIRVHRDTENRRTKLARIGTTAEIRQYRRLEDGSLNVVTRGQQRFQLKRRSFDVEGVPCGEIQIIEEDLPSRTPKDALVKLAPLSNLPRNRGISHTASNFSCTKLHGSKNGDGDSDESFESFEDELSPTERRIHQSLVGSGHEHDIMDESSSSDDEECLYEPDQEIRYNLNDSDMTRSLLSDGGKEAVNIDLIGASCSTSGSGMQSCKSEACKSTSANFSHGIPRAFWPHWVYQMFDSYCLAQRAADLWRNVVGTPSMDGLVKKPDVLSFYIASKIPVSESTRQELLEIDGISYRLRREIELLECVNLVRCRNCQTIIARRSDMLVMSREGPLGAYVNPGGYVHEVMTLHNACGLALVGRAYTQYSWFPGYAWTIANCATCESQMGWLFTATNRKMKPRSFWAIRSSQVAEEMR 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0507 588 ProSiteProfiles CULT domain profile. 480 587 IPR034750 -
Lele04g0507 588 FunFam Lon protease homolog 411 475 - -
Lele04g0507 588 ProSiteProfiles Lon N-terminal domain profile. 131 479 IPR003111 -
Lele04g0507 588 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 483 582 IPR004910 -
Lele04g0507 588 SUPERFAMILY PUA domain-like 130 478 IPR015947 -
Lele04g0507 588 MobiDBLite consensus disorder prediction 311 330 - -
Lele04g0507 588 SMART lon_5 130 479 IPR003111 -
Lele04g0507 588 FunFam ATP-dependent protease La domain-containing protein 111 239 - -
Lele04g0507 588 Gene3D Peptide methionine sulfoxide reductase. 477 588 - -
Lele04g0507 588 MobiDBLite consensus disorder prediction 70 96 - -
Lele04g0507 588 CDD CRBN_C_like 483 583 IPR034750 -
Lele04g0507 588 PANTHER CEREBLON 80 580 - -
Lele04g0507 588 FunFam Blast:Protein cereblon homolog 476 588 - -
Lele04g0507 588 Gene3D - 117 239 IPR046336 -
Lele04g0507 588 Gene3D - 411 476 - -
Lele04g0507 588 MobiDBLite consensus disorder prediction 281 302 - -
Lele04g0507 588 Pfam ATP-dependent protease La (LON) substrate-binding domain 131 478 IPR003111 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0507 Lele-ChrLele04 3063126 3067252 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0507 04 3063126 3067252 Lele04g0507 04 3063126 3067252 ECH
Lele01g0502 01 2977418 2981429 Lele04g0507 04 3063126 3067252 hybridization
Lele02g0488 02 2938165 2942284 Lele04g0507 04 3063126 3067252 hybridization