Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0511 ATGGATGACGATAGAATACGCGAGAGGGAGAGGCATCAGATCGAGCAGATTCGCCAGCTCGATGATGAAGAATTGCAGGTTGAGGAAGTTGATGACCTAGAAGACGATAGAATGCAAGTGGTAATGGGCGACGATAGAATACTCGAGAGGGAGATCAGCTCGACCTCGAAGAATTGCAGGTTGAAGAAGTCGATGACCTCCGAGACTCATCCGACGAGGACGCCAAGAGTTGTACTCTTTCCGGGCGCTACTCTTCCCCTGCGAGTCATACAACCCAATTTTGTTGCCGCCGTTGATCGAGCACTGAGCCAACTTGATGTTCCTTACACTATTGGTGTGATTAGAGTTCAGAGGGATACTGAAAATCGTAGGATAAAATTGGCAAGAATTGGAACAACTGCAGAGATTCGAAAATACAGGCGTCTAGAGGATGGTTCATTGAATGTGGTTACCCGTGGACAACAGCGATTTCAACTTAAACGCTGTTGGTTTGATGTGGAAGGAGTGCCTTGTGGAGAGATTCAAATTATTGAGGAAGATCTATCATCAAGAACTCCCAAAGACGCTTTAGTAAAATTAGCTCCATTGAGTAATCTACCTCGTAATCGTGGCGTCTCACATACAGCTTCAAATTTTTCTTGCACTAAATTGCATGGTTCCAAAAATGGGGACGGTGATTCAGGTGATTCAGAAGAGAGCTTCGAGAGCTTTGAGGATGAACTTTCACCAACGGAAAGGAGAATCAACCAATCACTCATTGGTTCTGGTCATGAGCATGATATTATGGATGAATCATCTAGCAGTGATTATGAAGAATGCATGTATGAGCCTGATCAGGAGAATAGATATAGCCTAAATGACTCTGACATGACGAGGGCAGCAGATTTATGGAGGAATGTGGTTGGGACACCAAGCATGGATGGTCTTGTGAAGAAGCCTGATGTTTTATCCTTTTATATTGCCAGTAAAATACCTGTGTCCGAATCTACAAGGCAGGAGCTTTTGGAGATAGATGGAATCTCATATAGATTGCGTAGGGAGATTGAATTACTTGAGCGTGTTAATCTTGTTCGATGTAGGAACTGCCAGACTATCATTGCAAGGCGGAGTGATATGTTGGTGATGTCTAGGGAGGGTCCTCTTGGTGCTTATGTTAATCCAGGTGGTTATGTACATGAGGTCATGACTCTGCACAACGCAAGTGACTTAGCACTTGTTGGGCGAGCATTTACACGGTACAGTTGGTTTCCGGGCTATGCATGGACAATTGCCAACTGTGCTACATGTGAAAGCCAAATGGGGTGGCTTTTTACAGCAACAAACAAAAAACTGAGACCCAGATCATTTTGGGCGATACGCAGTAGTCAAGTTGCGGAAGAGATGCGCTAA 1389 0.4456 MDDDRIRERERHQIEQIRQLDDEELQVEEVDDLEDDRMQVVMGDDRILEREISSTSKNCRLKKSMTSETHPTRTPRVVLFPGATLPLRVIQPNFVAAVDRALSQLDVPYTIGVIRVQRDTENRRIKLARIGTTAEIRKYRRLEDGSLNVVTRGQQRFQLKRCWFDVEGVPCGEIQIIEEDLSSRTPKDALVKLAPLSNLPRNRGVSHTASNFSCTKLHGSKNGDGDSGDSEESFESFEDELSPTERRINQSLIGSGHEHDIMDESSSSDYEECMYEPDQENRYSLNDSDMTRAADLWRNVVGTPSMDGLVKKPDVLSFYIASKIPVSESTRQELLEIDGISYRLRREIELLERVNLVRCRNCQTIIARRSDMLVMSREGPLGAYVNPGGYVHEVMTLHNASDLALVGRAFTRYSWFPGYAWTIANCATCESQMGWLFTATNKKLRPRSFWAIRSSQVAEEMR 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0511 462 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 357 456 IPR004910 -
Lele03g0511 462 FunFam Blast:Protein cereblon homolog 350 462 - -
Lele03g0511 462 FunFam Lon protease homolog 287 349 - -
Lele03g0511 462 ProSiteProfiles CULT domain profile. 354 461 IPR034750 -
Lele03g0511 462 Gene3D Peptide methionine sulfoxide reductase. 351 462 - -
Lele03g0511 462 ProSiteProfiles Lon N-terminal domain profile. 67 353 IPR003111 -
Lele03g0511 462 SUPERFAMILY PUA domain-like 77 352 IPR015947 -
Lele03g0511 462 SMART lon_5 73 353 IPR003111 -
Lele03g0511 462 PANTHER CEREBLON 300 454 - -
Lele03g0511 462 MobiDBLite consensus disorder prediction 210 243 - -
Lele03g0511 462 Gene3D - 61 177 IPR046336 -
Lele03g0511 462 Gene3D - 290 350 - -
Lele03g0511 462 Pfam ATP-dependent protease La (LON) substrate-binding domain 75 353 IPR003111 -
Lele03g0511 462 CDD CRBN_C_like 357 457 IPR034750 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0511 Lele-ChrLele03 2998715 3002722 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0511 03 2998715 3002722 Lele03g0511 03 2998715 3002722 ECH
Lele01g0502 01 2977418 2981429 Lele03g0511 03 2998715 3002722 hybridization
Lele02g0488 02 2938165 2942284 Lele03g0511 03 2998715 3002722 hybridization