Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0499 ATGCACCGCCCCCATGTGACGAACCATACGTCGGCTGCGTCTCGCTCGCCCATTTGTGAGCATCCACATTGCGATTCTCAGAGCTGCGACTTGCGAGAAGGTGTCGAAATGGACATTGAACTCGACGGGAAAACAACTTCGCAGCTCGATGACGATGGCTTGCCCAAAAGAACTGGGAACGTGTTGACGGCGACGACGCACATAATAACTGTGGTGGTCGGAGCAGGAGTGCTGGCACTACCCTGGGCGATGGCGCAACTAGGATGGATTGGAGGAATAGGCGTTATGGTCACCTTTTCATGCATCTCCATCTTCACTTACAATCTGATTGCCGATTGCTACAGATATCCCCACCCTATCTCCGGCACAAGAAACTACACTTACATGCAAGCCGTCAAGTCTTACTTGGGCGGCCGCATGCACCTTGCCTGCGGTTTCGTCCAGTATTCCAAGCTCGCCGGAATTACTGTTGGCTATTGCATCACCACCTCCACCAGCTTAGTGGCTATCAAGAAAGCTGGGTGCTTCCACCGAAAAGGCCATCAAGCTTACTGTAAATTTTCCAACAATCCTTTCATGGCTGCTTTTGGGGTCTTCCAGATATTCTTGTCACAAATTCCTAATTTCCACGAGCTTACCTGGCTCTCAACCATTGCCTGCATTACTTCTTTTGGTTATGCTCTTATTGGGAGTGCCCTTTCTCTCGCTGTCCTCGTCCAAGGACAAGGAAGGCCAACCAGCGTAACCGGAGAAGAAATAGGGCCTGAACTATCTGAAGAAGATAAAGTGTGGAGGATTTTCAGTGCAATGGGGAACATAGCGCTTGCTTGCTCCTATGCTACTGTTGTTTTTGATATTATGGACACATTGAAGTCATCTCCACCAGAATGCAAACAGATGAAAAAGGCTAACGTGTTAGGGATCACAGCAATGACAGCGCTCTTCCTTACATGTAGTGGCCTTGGCTATGCTGCTTTTGGGGACAAAACACCCGGCAACATGCTCACCGGCTTCGGATTTTACGATCCCTTCTGGCTGGTCGACATAGGAAACATATGCATCGTCATCCACATTCTGGGTGCATATCAGTTAATGGCTCAAGCATTCTTTCTTATAGTTGAAATGGGTGCAAAGATCATGTGGCCCAAGTCAGATTTTGTGCACAAAGAATACCCGTGCAGAATAGGAAAGGTGACAGTCAATTTGAACTTGTTTAGGCTTGTTTGGAGGACAATATTTGTGATAATATCGACTACTTTGGCCATGGCGATGCCTTTCTTCAATGAGTTTCTTGCGTTGCTCGGAGCTATTGGGTTCTGGCCCCTGATTGTGTTTTTCCCAGTACAAATGCACATTGCCCAGAGACAGATAAAAGCCCTATCACTCAAGTGGTGTGCGCTACAACTGCTGAGCTTTGTTTGCTTCCTTGTTTCATTGGCCGCTGCAGTTGGTGCTATTCATGGAATCAGCCACAATCTCTCCAAATACAAGGCCTTCATGTATAAACAATAG 1512 0.4762 MHRPHVTNHTSAASRSPICEHPHCDSQSCDLREGVEMDIELDGKTTSQLDDDGLPKRTGNVLTATTHIITVVVGAGVLALPWAMAQLGWIGGIGVMVTFSCISIFTYNLIADCYRYPHPISGTRNYTYMQAVKSYLGGRMHLACGFVQYSKLAGITVGYCITTSTSLVAIKKAGCFHRKGHQAYCKFSNNPFMAAFGVFQIFLSQIPNFHELTWLSTIACITSFGYALIGSALSLAVLVQGQGRPTSVTGEEIGPELSEEDKVWRIFSAMGNIALACSYATVVFDIMDTLKSSPPECKQMKKANVLGITAMTALFLTCSGLGYAAFGDKTPGNMLTGFGFYDPFWLVDIGNICIVIHILGAYQLMAQAFFLIVEMGAKIMWPKSDFVHKEYPCRIGKVTVNLNLFRLVWRTIFVIISTTLAMAMPFFNEFLALLGAIGFWPLIVFFPVQMHIAQRQIKALSLKWCALQLLSFVCFLVSLAAAVGAIHGISHNLSKYKAFMYKQ 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0499 503 Pfam Transmembrane amino acid transporter protein 58 488 IPR013057 -
Lele01g0499 503 PANTHER OS05G0424000 PROTEIN-RELATED 61 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0499 Lele-ChrLele01 2964329 2967603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0499 39 499 Organic Solute Cotransporters AT1G10010 51.293 4.30e-180 512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0499 01 2964329 2967603 Lele01g0499 01 2964329 2967603 ECH
Lele01g0499 01 2964329 2967603 Lele03g0509 03 2986022 2989456 hybridization
Lele01g0499 01 2964329 2967603 Lele04g0505 04 3044884 3049195 hybridization