Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0505 ATGGACATTGAGCCCGGCGGCAAAATCGCTTCGCTTGTCGACGACGACGGCAAGCCCAGGAGAACCGGGAATGCGTTGACGGCGACGACGCACATAATAACTGTGGTGGTCGGAGCAGGAGTGCTGGCACTACCGTGGGCGATGGCGCAACTTGGATGGATCGGAGGAATAGGCGTTATGACCACCTTTGCATGCATCTCCATCTTCACTTACAATCTGCTTGTTGATTGCTACAGATATCCCAACCCTGTCTCCGGCACCAGAAACTACACTTACATGCAAGCGGTTGAGTCTTACTTGGGCGGCCGCTGGCACATCGCCTGCGGTATCGTCCAGTATTCCAAACTCGCCGGAGCTGCTGTTGGCTATTGCATCACCACCTCCACCAGCTTAGTGGCTATCAAGAAAGCCGGGTGCTTCCACCAAAGAGGCCGTCAAGCTCATTGCAAGTTTTCCAACAATCCTTTCATGGCTGGCTTTGGGATCCTCCAGATATTCTTGTCCCAAATCCCTAATTTCCATGGCCTTACCTGGCTCTCAACCATTGCCTGCATTACCTCTTTTTGTTATACTCTTATTGGGAGTGCCCTTTCCCTCGCTGTCCTCGTCCAAGGACAAGGAAGGCCAACCAGTTTAACCGGAGTAGAAGTAGGTCCTGAGCTTTCTGAACAAGATAAAATATGGAGAATTTTCAGTGCAATGGGGGACATAGCGTTTGCTGTCTCTTATTCTGGCATTGTTTTTGATATTATGGACACGTTGAAGTCATCTCCACCAGAATCCAAACAGATGAAAAAGGCTAACGTGTTAGGGATCACAACAACGACATCACTCTTCCTTGCATGTGGTGCCCTTGGCTATGCTGCTTTTGGGGACAAAACACCCGGCAACATCCTCACTGGCTTCGGATTTTACGAACCCTACTGGCTGGTCGACATAGGAAACATATGCATCGTCATCCACCTTGTCGGCGCGTATCAGCTGCCGACTCAAGTATTCTTTCTTATAGTTGAAATGGGTGCAAAGAGCAAGTGGCCCAAGTCAGATTTTGTGCACAAAGAATACCCGTGCAGAATAGGGAAGGTGACATTCAATTTGAACATGTTTAGGCTTGTTTGGAGGACAATATTTGTGATAATAGCCACTACTCTGGCCATGGCGATGCCCTTCTTCAATGAGTTTCTTGCCCTGCTCGGAGCTTTTGGGTTCTGGCCTATGATTGTGTTTTTCCCTATACAAATGCACATTGCCCAGAGACAGATAAAAACCCTATCGATCAGGTGGTGTGCGCTACAATTGTTGAGCTTTGTTTGCTTCCTTGTTTCATTGGCCGCAACAGCTGGTGCAATTCATGGAATCAGCCACAATCTCGTCAAATACAAGCCCTTCATGTATAAACAATAG 1404 0.4829 MDIEPGGKIASLVDDDGKPRRTGNALTATTHIITVVVGAGVLALPWAMAQLGWIGGIGVMTTFACISIFTYNLLVDCYRYPNPVSGTRNYTYMQAVESYLGGRWHIACGIVQYSKLAGAAVGYCITTSTSLVAIKKAGCFHQRGRQAHCKFSNNPFMAGFGILQIFLSQIPNFHGLTWLSTIACITSFCYTLIGSALSLAVLVQGQGRPTSLTGVEVGPELSEQDKIWRIFSAMGDIAFAVSYSGIVFDIMDTLKSSPPESKQMKKANVLGITTTTSLFLACGALGYAAFGDKTPGNILTGFGFYEPYWLVDIGNICIVIHLVGAYQLPTQVFFLIVEMGAKSKWPKSDFVHKEYPCRIGKVTFNLNMFRLVWRTIFVIIATTLAMAMPFFNEFLALLGAFGFWPMIVFFPIQMHIAQRQIKTLSIRWCALQLLSFVCFLVSLAATAGAIHGISHNLVKYKPFMYKQ 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0505 467 Pfam Transmembrane amino acid transporter protein 22 451 IPR013057 -
Lele04g0505 467 PANTHER OS05G0424000 PROTEIN-RELATED 25 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0505 Lele-ChrLele04 3044884 3049195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0505 3 463 Organic Solute Cotransporters AT1G10010 51.293 0.0 520
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0505 04 3044884 3049195 Lele04g0505 04 3044884 3049195 ECH
Lele01g0499 01 2964329 2967603 Lele04g0505 04 3044884 3049195 hybridization
Lele02g0485 02 2917751 2922205 Lele04g0505 04 3044884 3049195 hybridization