Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0509 ATGGGAGAATCATACGTTAACATAATAATTGACGAGTCGGCTGCGTCTCGCGCGCCCATTTGTGAGCATCCACATCGCGATTCTCAGAGCTGCGACTTGCGAGAAGGTGTCGAAATGGACATTGAACCCGACGGGAAAACCGCTTCGCAGCTCGATGACGATGGCATGCCCAAAAGAACTGGGAACGTGTTGACGGCGACGACGCACATAATAACTGTGGTGGTCGGAGCAGGAGTGCTGGCACTACCCTGGGCGATGGCGCAACTAGGATGGATCGGAGGAATAGGCGTTATGGTCACCTTTTCATGCATCTCCATCTTCACTTACAATCTGATTGCCGATTGCTACAGATATCCCCACCCTATCTCCGGCACAAGAAACTACACTTACATGCAAGCCGTCAAGTCTTACTTGGGCGGCCGAATGCACCTTGCCTGCGGTTTCGTCCAGTATTCCAAGCTGGCCGGAATTACTGTTGGCTATTGCATCACCACCTCCACCAGCTTAGTGGCTATCAAGAAAGCTGGGTGCTTCCACCGAAAAGGCCATCAAGCTTATTGCAAATTTTCCAACAATCCTTTCATGGCTGCTTTTGGGGTCGTCCAGATATTCTTGTCGCAAATTCCTAATTTCCACGAGCTTACCTGGCTCTCAACCATTGCCTGCATTACTTCTTTTGGTTATGCTCTTATTGGGAGTGCCCTTTCTCTCGCTGTCATCGTCCAAGGACAAGGAAGGCCAACCAGCGTAACCGGAGTAGAAATAGGGCCTGAACTATCTGAAGAAGATAAAGTGTGGAGGATTTTCAGTGCAATGGGGAACATAGCGCTTGCTTGCTCCTATGCTACTGTTGTTTTTGATATTATGGACACATTGAAGTCATCTCCACCAGAATGCAAACAGATGAAAAAGGCTAACGTGTTAGGGATCACAGCAATGACAGCGCTCTTCCTTACATGTGGTGGCCTTGGCTATGCTGCTTTTGGGGACAAAACACCCGGCAACATGCTCACCGGCTTCGGATTTTACGATCCCTTCTGGCTGGTCGACATAGGAAACATATGCATCGTCATCCACATTCTGGGTGCATATCAGTTAATGGCTCAAGCATTCTTTCTTATAGTTGAAATGGGGGCAAATATCATGTGGCCCAAGTCAGATTTTGTGCACAAAGAATACCCGTGCAGAATAGGAAAGGTGACATTCAATTTTAACTTGTTTAGGCTTGTTTGGAGGACAATATTTGTGATAATATCCACTACTTTGGCCATGGCGATGCCTTTCTTCAATGAGTTTCTTGCGTTGCTCGGAGCTATTGGGTTCTGGCCTCTGATTGTGTTTTTCCCAGTACAAATGCACATTGCCCAGAGACAGATAAAAGCCCTATCACTCAAGTGGTGTGCGCTACAACTGCTGAGCTTTGTTTGCTTCCTTGTTTCATTGGCCGCAGCAATTGGTGCCATTCATGGAATCAGCCACAATCTCTCCAAATACAAGGCCTTCATGTATAAACAATAG 1518 0.473 MGESYVNIIIDESAASRAPICEHPHRDSQSCDLREGVEMDIEPDGKTASQLDDDGMPKRTGNVLTATTHIITVVVGAGVLALPWAMAQLGWIGGIGVMVTFSCISIFTYNLIADCYRYPHPISGTRNYTYMQAVKSYLGGRMHLACGFVQYSKLAGITVGYCITTSTSLVAIKKAGCFHRKGHQAYCKFSNNPFMAAFGVVQIFLSQIPNFHELTWLSTIACITSFGYALIGSALSLAVIVQGQGRPTSVTGVEIGPELSEEDKVWRIFSAMGNIALACSYATVVFDIMDTLKSSPPECKQMKKANVLGITAMTALFLTCGGLGYAAFGDKTPGNMLTGFGFYDPFWLVDIGNICIVIHILGAYQLMAQAFFLIVEMGANIMWPKSDFVHKEYPCRIGKVTFNFNLFRLVWRTIFVIISTTLAMAMPFFNEFLALLGAIGFWPLIVFFPVQMHIAQRQIKALSLKWCALQLLSFVCFLVSLAAAIGAIHGISHNLSKYKAFMYKQ 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0509 505 Pfam Transmembrane amino acid transporter protein 60 490 IPR013057 -
Lele03g0509 505 PANTHER OS05G0424000 PROTEIN-RELATED 63 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0509 Lele-ChrLele03 2986022 2989456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0509 41 501 Organic Solute Cotransporters AT1G10010 51.509 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0509 03 2986022 2989456 Lele03g0509 03 2986022 2989456 ECH
Lele01g0499 01 2964329 2967603 Lele03g0509 03 2986022 2989456 hybridization
Lele02g0485 02 2917751 2922205 Lele03g0509 03 2986022 2989456 hybridization