Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0335 ATGGCTTCCGAGAAGGTTGAGACTGTGGTTGCTGGAAACTACTTAGAAATGGAGAGAGAGGATGAAGATTCTAAGTCAGCTAGGAGCAAGCTATCCAAGTTCTTCTGGCATGGTGGTTCGGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTACTGACATTACCGTATTCGTTTTCCCAACTGGGCATGCTATCTGGGATTCTATTTCAGCTTTTCTATGGGTTGATGGGAAGCTGGACTGCTTACCTCATCAGCATCCTTTATGTTGAGTACAGAACCAGAAAAGAAAGAGAAAAGGTTGATTTCAGAAACCATGTGATTCAGTGGTTTGAAGTTCTTGATGGACTCCTAGGCAAACACTGGAGAAATATAGGTCTCTTTTTCAACTGCACTTTCCTTTTGTTCGGATCAGTGATTCAACTAATCGCCTGCGCAAGTAACATATACTACATAAACGACAACCTCGACAAGAGAACCTGGACTTACATCTTTGGCGCCTGCTGTGCGACAACTGTGTTTATCCCGTCTTTCCACAATTATAGAATCTGGTCATTCTTGGGCCTCATGATGACCAGTTACACCGCATGGTATCTCACCATAGCTTCCCTTCTTCACGGGCAGGTTGAGGGGGTGAAGCACTCGGGACCAGCCAAATTAGTTCTCTACTTTACTGGGGCCACTAACATTCTCTACACTTTTGGTGGACATGCTGTCACAGTGGAAATTATGCATGCGATGTGGAAGCCACAGAAGTTCAAGATGATATATCTATTGGCAACATTATATGTGCTGACTTTGACTTTACCATCGGCATCAGCTGTGTACTGGGCATTTGGGGATATGCTCCTTACTCATTCCAATGCTCTCTCTTTGCTCCCAAAGACACGCTTCAGGGACACCGCTGTTATTCTCATGCTCATTCACCAGTTCATAACTTTTGGATTTGCCTGCACTCCTCTGTACTTTGTGTGGGAAAAATTCATCGGAGTGCATGAGACCAAGAGCTTGTTCAAAAGGGCGTTGGCCAGACTTCCTGTGGTAATCCCAATATGGTTTCTTGCCATCATATTCCCTTTCTTTGGGCCCATCAACTCAACTGTCGGATCTCTCTTGGTCAGCTTCACCGTTTACATTATTCCGGCCATGGCACACATGGTCACTTTTGCTTCTGCCCCGGCCAGAGAGAATGCTGTGGAGAGACCACCATCGATTGTAGGAGGATGGGTGGGAACCTACTCCATGAACGTGTTTGTGGTGGTGTGGGTTTTGGTGGTAGGATTTGGGTTGGGAGGATGGGCGAGCATGCTAAATTTCATACAACAAATTAACACATTTGGGCTCTTTGCCAAGTGCTATCAGTGTCCCCCTCATAAGGCATAA 1398 0.4571 MASEKVETVVAGNYLEMEREDEDSKSARSKLSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTSYTAWYLTIASLLHGQVEGVKHSGPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNALSLLPKTRFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPAMAHMVTFASAPARENAVERPPSIVGGWVGTYSMNVFVVVWVLVVGFGLGGWASMLNFIQQINTFGLFAKCYQCPPHKA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0335 465 PANTHER OS05G0424000 PROTEIN-RELATED 43 426 - -
Lele01g0335 465 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0335 Lele-ChrLele01 1928802 1930920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0335 1 464 Organic Solute Cotransporters AT1G77690 88.060 0.0 836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0335 01 1928802 1930920 Lele01g0335 01 1928802 1930920 ECH
Lele01g0335 01 1928802 1930920 Lele03g0342 03 1920179 1922317 hybridization
Lele01g0335 01 1928802 1930920 Lele04g0338 04 1972089 1974254 hybridization