Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0338 ATGGCTTCCGAGAAGGTTGAGACTGTGGTTGCTGGAAACTACCAAGAAATGGAGAGAGAGGATGGAGATTCTAATTCAGCTAGGAGCAAGCTATCTAAGTTCTTCTGGCATGGTGGCTCGGTCTATGATGCATGGTTTAGCTGCGCTTCTAATCAGGTTGCACAAGTGCTACTGACATTACCGTATTCGTTTTCCCAACTGGGGATGTTATCTGGGATTCTATTCCAGCTTTTTTATGGGTTGATGGGAAGCTGGACTGCTTACCTCATCAGCATCCTTTATGTTGAGTACAGAACCAGAAAAGAAAGAGAAAAGGTTGATTTCAGAAACCATGTGATTCAGTGGTTTGAAGTTCTTGATGGACTCCTAGGCAAACACTGGAGAAACATAGGTCTCTTTTTCAACTGCACTTTCCTTTTGTTTGGATCAGTGATTCAGCTAATCGCCTGCGCAAGTAACATATACTACATAAACGACAACCTCGACAAGAGAACCTGGACTTACATCTTTGGCGCCTGCTGTGCGACAACTGTGTTTATCCCTTCTTTCCACAATTATAGAATCTGGTCATTCCTGGGCCTCATGATGACCAGTTACACCGCATGGTATCTCACCATAGCCTCTCTTCTTCACGGACAGGTTGAGGGGGTGAAGCACTCGGGACCAGCCAAATTAGTTCTCTACTTCACTGGGGCTACTAACATTCTCTACACTTTTGGTGGACATGCTGTCACAGTGGAAATTATGCATGCGATGTGGAAGCCACAGAAGTTCAAGTCAATATATCTATTGGCAACATTATATGTGCTGACTTTGACTTTACCATCAGCATCAGCTGTGTACTGGGCATTTGGGGACATGCTCCTTACTCATTCCAATGCTCTCTCTTTGCTCCCAAGGACAGGCTTCAGGGACACCGCTGTTATTCTCATGCTCATTCACCAGTTCATAACTTTTGGATTTGCCTGCACTCCCCTGTACTTTGTGTGGGAAAAATTCATCGGAGTGCATGAAACCAAGAGCTTGTTCAAAAGGGCGTTGACCAGACTTCCTGTGGTGATTCCAATATGGTTTCTTGCCATCATATTCCCTTTCTTTGGGCCCATCAACTCAACCGTTGGATCTCTCTTGGTCAGCTTCACTGTTTACATTATTCCGGCCATGGCACACATGGTCACTTTTGCTTCTGCCCCGGCCAGAGAGAATGCTGTGGAGAGACCACCATCGATTGTAGGAGGATGGGTAGGAACCTACTCCATGAACGTGTTCGTGGTGGTGTGGGTTTTGGTGGTAGGATTTGGGTTGGGAGGATGGGCGAGCATGCTAAATTTCATACAACAAATTAACACATTTGGGCTCTTTGCCAAGTGCTATCAGTGTCACCCTCATAAGGCATAA 1398 0.4564 MASEKVETVVAGNYQEMEREDGDSNSARSKLSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNIGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTSYTAWYLTIASLLHGQVEGVKHSGPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKSIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNALSLLPRTGFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALTRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPAMAHMVTFASAPARENAVERPPSIVGGWVGTYSMNVFVVVWVLVVGFGLGGWASMLNFIQQINTFGLFAKCYQCHPHKA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0338 465 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
Lele04g0338 465 PANTHER OS05G0424000 PROTEIN-RELATED 43 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0338 Lele-ChrLele04 1972089 1974254 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0338 1 464 Organic Solute Cotransporters AT1G77690 87.207 0.0 828
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0338 04 1972089 1974254 Lele04g0338 04 1972089 1974254 ECH
Lele01g0335 01 1928802 1930920 Lele04g0338 04 1972089 1974254 hybridization
Lele02g0328 02 1851786 1853951 Lele04g0338 04 1972089 1974254 hybridization