Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0342 ATGGCTTCCGAGAAGGTTGAGACTGTGGTTGCTGGAAACTACTTAGAAATGGAGAGAGAGGATGAAGATTCTAAGTCAGCTAGGAGCAAGCTATCCAAGTTCTTCTGGCATGGTGGCTCTGTCTATGATGCATGGTTTAGCTGTGCTTCTAATCAGGTTGCACAAGTGCTACTGACATTACCGTATTCGTTTTCCCAACTGGGCATGCTATCTGGGATTCTATTTCAGCTTTTCTATGGGTTGATGGGAAGCTGGACTGCTTACCTCATCAGCATCCTTTATGTTGAGTACAGAACCAGAAAAGAAAGAGAAAAGGTTGATTTCAGAAACCATGTGATTCAGTGGTTTGAAGTTCTTGATGGACTCCTAGGCAAACACTGGAGAAACATGGGTCTCTTTTTCAACTGCACTTTCCTTTTGTTCGGATCAGTGATTCAACTAATCGCCTGCGCAAGTAACATATACTACATAAACGACAACCTCGACAAGAGAACCTGGACTTACATCTTTGGCGCCTGCTGTGCGACAACAGTGTTTATCCCTTCTTTCCACAATTATAGAATCTGGTCATTCTTGGGCCTCATGATGACCAGTTACACCGCATGGTATCTCACCATAGCTTCCCTTCTTCACGGGCAGGTTGAGGGGGTGAAGCACTCGGGACCAGCCAAATTAGTTCTCTACTTTACTGGGGCCACTAACATTCTCTACACTTTTGGTGGACATGCTGTCACAGTGGAAATTATGCATGCGATGTGGAAGCCACAGAAGTTCAAGATGATATATCTATTGGCAACATTATATGTGCTGACTTTGACTTTACCATCAGCATCAGCTGTGTACTGGGCATTTGGGGACATGCTCCTTACTCATTCCAATGCTCTCTCTTTGCTCCCAAAGACACGCTTCAGGGACACCGCTGTTATTCTCATGCTCATTCACCAGTTCATAACTTTTGGATTTGCCTGCACTCCTCTGTACTTTGTGTGGGAAAAATTCATCGGAGTGCATGAGACCAAGAGCTTGTTCAAAAGGGCGTTGGCCAGACTTCCTGTGGTGATCCCAATATGGTTTCTTGCCATCATATTCCCTTTCTTTGGGCCCATCAACTCAACTGTCGGATCTCTCTTGGTCAGCTTCACCGTTTACATTATTCCGGCCATGGCACACATGGTCACTTTTGCTTCTGCCCCGGCCAGAGAGAATGCTGTGGAGAGACCACCATCGATTGTAGGAGGATGGGTGGGAACCTACTCCATGAACGTGTTTGTGGTGGTGTGGGTTTTGGTGGTAGGATTTGGGTTGGGAGGATGGGCGAGCATGCTAAATTTCATACAACAAATTAACACATTTGGGCTCTTTGCCAAGTGCTATCAGTGTCCCCCTCATAAGGCATAA 1398 0.4585 MASEKVETVVAGNYLEMEREDEDSKSARSKLSKFFWHGGSVYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLMGSWTAYLISILYVEYRTRKEREKVDFRNHVIQWFEVLDGLLGKHWRNMGLFFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLMMTSYTAWYLTIASLLHGQVEGVKHSGPAKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKMIYLLATLYVLTLTLPSASAVYWAFGDMLLTHSNALSLLPKTRFRDTAVILMLIHQFITFGFACTPLYFVWEKFIGVHETKSLFKRALARLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPAMAHMVTFASAPARENAVERPPSIVGGWVGTYSMNVFVVVWVLVVGFGLGGWASMLNFIQQINTFGLFAKCYQCPPHKA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0342 465 PANTHER OS05G0424000 PROTEIN-RELATED 43 426 - -
Lele03g0342 465 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0342 Lele-ChrLele03 1920179 1922317 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0342 1 464 Organic Solute Cotransporters AT1G77690 88.060 0.0 836
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0342 03 1920179 1922317 Lele03g0342 03 1920179 1922317 ECH
Lele01g0335 01 1928802 1930920 Lele03g0342 03 1920179 1922317 hybridization
Lele02g0328 02 1851786 1853951 Lele03g0342 03 1920179 1922317 hybridization