Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0142 ATGGAGGAGGAAGAATTCAGACTGACAACATTGTCCATTTTCTGTCTTCTTCGACTCTCTCATCCCTCTATTATTGCTTCTTGCTCCTATAAGAAACACAACTTTAGTGACATTTATCTATCATTGTTTTTACTATTGAATCTGAATTCATCCTCAACAGCCGCATCCTTTTCAACTATACCCACTCCCGTCATCGGCTTAACCCAGCCTCACCGTGCTCTTTTTGTTCTTTTGTTCATCGATGATCCTTATCAAGAGTTGCGGTGGAGGTTCGGCCCACATGACCGATCAAATATGGGACCAAGAAAGCCCAAAGAATCACCAGCTTTTCTCCTTGGGTTAATGATGGGCCCAAATTTGCCTCCGTTAAGCAACAAAACGGCCCGAAGCGAAATAAAACCCAAAATCCTGGAGCAAGAGTCCGAGAGAGTTGCCATCCCCATCGACCGCCGTTTCGAAGTCGCCATGTCGCCAGGTCCCGTTGTTGAGGCAGGTGCAGATGAACAGCTTCCATCCGCCGAGGAGACTCAGAAGAAGAACCATGAACCAAAGGATGGCGATGCTCCGGTCGTTGAGGATGTCAAGGACGACGACAAAGGCGAAGATGATGACGAGGACGACGACAAAGACGAAGACGAAGACGATGATGAGGACGATGGTGCTCAAGGTGGTACTGAGGGTTCAAAGCAAAGCAGAAGCGAGAAGAAGAGTCGGAAAGCCATGTTGAAGCTCGGACTGAAGCCTGTTACTGGTGTTAGCAGGGTCACCATCAAGAGAACAAAAAATATTCTTTTTTTCATCTCAAAGCCAGACGTGTTCAAGAGTCCAAACTCAGAGACCTATGTCATATTTGGGGAAGCCAAAATAGAGGATTTGAGCTCACAGTTGCAGACACAAGCTGCTCAGCAGTTCAGGATGCCAGATATGGGATCAGTGGTGGCAAAACCAGATGCTGCTGCGGCAGCTGATGCAGGAGCACAGCCCGATGAGGAAGAAGAAGAGGTTGATGAAACGGGAGTGGAGCCTCGTGACATTGACTTGGTGATGACACAGGCCGGAGTGTCGAGAAGCAAGGCCGTCAAGGCTCTCAAGACTCACCAGGGAGACATTGTTGGGGCTATCATGGAGCTCACTACTTAA 1140 0.4842 MEEEEFRLTTLSIFCLLRLSHPSIIASCSYKKHNFSDIYLSLFLLLNLNSSSTAASFSTIPTPVIGLTQPHRALFVLLFIDDPYQELRWRFGPHDRSNMGPRKPKESPAFLLGLMMGPNLPPLSNKTARSEIKPKILEQESERVAIPIDRRFEVAMSPGPVVEAGADEQLPSAEETQKKNHEPKDGDAPVVEDVKDDDKGEDDDEDDDKDEDEDDDEDDGAQGGTEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVVAKPDAAAAADAGAQPDEEEEEVDETGVEPRDIDLVMTQAGVSRSKAVKALKTHQGDIVGAIMELTT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0142 379 MobiDBLite consensus disorder prediction 326 340 - -
Lele01g0142 379 Gene3D - 240 293 IPR038187 -
Lele01g0142 379 MobiDBLite consensus disorder prediction 318 342 - -
Lele01g0142 379 MobiDBLite consensus disorder prediction 172 195 - -
Lele01g0142 379 Pfam HYPK UBA domain 339 378 IPR044034 -
Lele01g0142 379 SMART NAC_2 234 290 IPR002715 -
Lele01g0142 379 CDD UBA_NAC_euk 342 378 - -
Lele01g0142 379 ProSiteProfiles NAC A/B domain profile. 231 296 IPR002715 -
Lele01g0142 379 FunFam Putative nascent polypeptide-associated complex subunit alpha 340 377 - -
Lele01g0142 379 MobiDBLite consensus disorder prediction 169 240 - -
Lele01g0142 379 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 173 378 IPR016641 GO:0005854
Lele01g0142 379 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 241 293 - -
Lele01g0142 379 Pfam NAC domain 234 289 IPR002715 -
Lele01g0142 379 Gene3D - 340 377 - -
Lele01g0142 379 MobiDBLite consensus disorder prediction 196 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0142 Lele-ChrLele01 833403 837174 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g0142 01 833403 837174 Lele01g0142 01 833403 837174 ECH
Lele01g0142 01 833403 837174 Lele03g0152 03 808149 809999 hybridization
Lele01g0142 01 833403 837174 Lele04g0145 04 821346 822031 hybridization