Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0145 ATGGGCTGTTTAATTGTGGTTAGTTGTTGTGTTGTGAAATTTGTGGATTGCATATACCTTTTCTCAAGTGCTACTGAGGGTTCTAAGCAAAGCAGAAGTGAGAAGAAGAGTCGGAAAGCCATGTTGAAGCTGGGACTGAAGCCTGTTACTGGTATTAGCAGGGTTACAATCAAGAGAACGAAAAATGTAAGCCATTCATTATCTAACTTGCTATGTGGACGCAAGCTGCTCAGCAGTTCAGGAGCAAAGCCTGATGAGGAAGAAGAGGTTGACGAAACAGGAGTGGAGCCTCGTGACATTGACTTGGTGATGACTCAGGCTGGAGTGTCGAGAAGCAAGGCCGTCAAGGCTCTCAAGAATCACCATGGAGATATTGTTGGGGCTATCATGGAACTCACTACTTAA 405 0.4494 MGCLIVVSCCVVKFVDCIYLFSSATEGSKQSRSEKKSRKAMLKLGLKPVTGISRVTIKRTKNVSHSLSNLLCGRKLLSSSGAKPDEEEEVDETGVEPRDIDLVMTQAGVSRSKAVKALKNHHGDIVGAIMELTT 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0145 134 FunFam Putative nascent polypeptide-associated complex subunit alpha 95 132 - -
Lele04g0145 134 Gene3D - 95 132 - -
Lele04g0145 134 CDD UBA_NACA_NACP1 88 133 - -
Lele04g0145 134 Pfam NAC domain 34 63 IPR002715 -
Lele04g0145 134 Pfam HYPK UBA domain 94 133 IPR044034 -
Lele04g0145 134 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 26 69 IPR016641 GO:0005854
Lele04g0145 134 Gene3D - 40 69 IPR038187 -
Lele04g0145 134 MobiDBLite consensus disorder prediction 77 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0145 Lele-ChrLele04 821346 822031 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele04g0145 04 821346 822031 Lele04g0145 04 821346 822031 ECH
Lele01g0142 01 833403 837174 Lele04g0145 04 821346 822031 hybridization
Lele02g0147 02 826780 827186 Lele04g0145 04 821346 822031 hybridization