Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0152 ATGTCGCCAGGTCCCGTTGTTGAGGCAGCTGCAGATGAACAGCTTCCATCCGCCGAGGAGACTCAGAAGAAGAACCATGAACCAAAGGATGACGATGCTCCGGTCGTTGAGGATGTGAAGGACAGCGACAAAGACGAAGATGATGACGAGGACGACGACAAAGACGAAGACGATGATGAGGACGATGGTGCTCAAGGCGGTACTGAGGGTTCAAAGCAAAGCAGAAGCGAGAAGAAGAGTCGGAAAGCCATGTTGAAGCTGGGACTGAAGCCTGTTACTGGTGTTAGCAGGGTCACAATCAAGAGAACGAAAAATATTCTTTTTTTCATCTCAAAGCCAGACGTGTTCAAGAGTCCAAACTCAGAGACCTATGTCATATTTGGGGAAGCCAAAATAGAGGATTTGAGCTCACAGTTGCAGACACAAGCTGCTCAGCAGTTCAGGATGCCAGATATGGGATCAGTGGTGGCAAAACCAGATGCTGCTGCGGCAGCTGATGCAGGAGCACAGCCCGATGAGGAAGAAGAAGAGGTTGATGAAACGGGAGTGGAGCCTCGTGACATTGACTTGGTGATGACGCAGGCCGGAGTGTCGAGAAGCAAGGCCGTCAAGGCTCTCAAGACTCACCAGGGAGACATTGTTGGGGCTATCATGGAGCTCACTACTTAA 669 0.5067 MSPGPVVEAAADEQLPSAEETQKKNHEPKDDDAPVVEDVKDSDKDEDDDEDDDKDEDDDEDDGAQGGTEGSKQSRSEKKSRKAMLKLGLKPVTGVSRVTIKRTKNILFFISKPDVFKSPNSETYVIFGEAKIEDLSSQLQTQAAQQFRMPDMGSVVAKPDAAAAADAGAQPDEEEEEVDETGVEPRDIDLVMTQAGVSRSKAVKALKTHQGDIVGAIMELTT 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0152 222 SMART NAC_2 77 133 IPR002715 -
Lele03g0152 222 MobiDBLite consensus disorder prediction 169 183 - -
Lele03g0152 222 PANTHER NASCENT POLYPEPTIDE ASSOCIATED COMPLEX ALPHA SUBUNIT-RELATED 19 221 IPR016641 GO:0005854
Lele03g0152 222 Gene3D - 183 220 - -
Lele03g0152 222 Pfam HYPK UBA domain 182 221 IPR044034 -
Lele03g0152 222 FunFam Nascent polypeptide-associated complex (NAC), alpha subunit 84 136 - -
Lele03g0152 222 Pfam NAC domain 77 132 IPR002715 -
Lele03g0152 222 ProSiteProfiles NAC A/B domain profile. 74 139 IPR002715 -
Lele03g0152 222 MobiDBLite consensus disorder prediction 1 84 - -
Lele03g0152 222 MobiDBLite consensus disorder prediction 41 64 - -
Lele03g0152 222 MobiDBLite consensus disorder prediction 17 40 - -
Lele03g0152 222 FunFam Putative nascent polypeptide-associated complex subunit alpha 183 220 - -
Lele03g0152 222 CDD UBA_NAC_euk 185 221 - -
Lele03g0152 222 MobiDBLite consensus disorder prediction 159 186 - -
Lele03g0152 222 Gene3D - 83 136 IPR038187 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0152 Lele-ChrLele03 808149 809999 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele03g0152 03 808149 809999 Lele03g0152 03 808149 809999 ECH
Lele01g0142 01 833403 837174 Lele03g0152 03 808149 809999 hybridization
Lele02g0147 02 826780 827186 Lele03g0152 03 808149 809999 hybridization