Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g01120 ATGATGGAAGCGTTTCAAGGGACGAGGGATGACATTTCACTCCAAGTGGGTATGATTTGGAGCCAAGTGAAGGAGCCAGTGATGGTGCCACTGCTGAGAGTGGCTGTGTTTGTGTGTTTGGCCATGTCGTTGATGATGTTGGTGGAGAGAGTGTACATGGGCCTTGTCATTTGCTTGGTGAAGCTGTTCGGTCGAAGACCTGAGAAGCGTTACAAGTGGGAGCCCATGAAGGAAGACGTTGAGTTGGGAAACTCATCTTATCCCATGGTCTTGGTCCAAGTCCCAATGTACAACGAAAGAGAGGTTTATCAACTCTCAATTGGTGCTGCTTGTGGCCTTTCTTGGCCTTCAGATAGGATCATCATACAAATTCTTGATGATTCTACTGACCCATCAATCAAGGAGTTGGTGCAAATGGAATGTAGCAGATGGGCAAGCAAAGGAGTGAACATAAAGTACGAAGTGAGGGACAACAGAAACGGGTACAAAGCAGGGGCACTGAAAGAAGGGATGAAACGTAGCTACGTGAAGCAATGTGACTATGTGGCCATCTTTGACGCAGATTTTCAACCAGAGCCTGATTTTCTCTGGCGAACTGTCCCATTCCTTGTCAACAACCCTGAACTTGGTCTTGTTCAGGCACGCTGGAAGTTTGTGAATGCCAATGAATGTTTGATGACCAGGATGCAAGAGATGTCTCTGGATTACCATTTCACTGTGGAACAAGAAGTGGGGTCTTCCACTTACGCCTTCTTTGGCTTCAATGGAACTGCCGGTTTATGGAGAATTTCGGCGCTGAATGAGGCTGGGGGATGGAAGGATAGAACCACTGTGGAAGATATGGACCTGGCTGTCCGAGCCAGTCTTAAAGGATGGAAATTCTTATACCTGGCCAATTTGAAGGTTAAAAATGAATTACCAAGTACTTTGAAGGCCTACCGCTACCAACAGCACAGGTGGTCTTGTGGACCAGCCAATCTTTTCAAGAAAATGGTCATGGAGATTATGAGGAACAAGAAAGTATCCTTGTGGAAGAAGATTTACGTGGTTTACAGTTTCTTCTTCGTCCGGAAGGTCGTGGCCCACATAAACACTTTCGTGTTCTATTGCATTGTGTTACCTGCAACAGTTGTGGTGCCAGAGGTGGTGGTACCCAAGTGGGGTGCTGTGTATATCCCTTCTATCATTACACTCCTAAATGCTGTTGGAACTCCAAGGTCACTTCACCTACTGGTCTTCTGGATTCTCTTTGAGAATACCATGTCTCTGCATCGAACAAAGGCTACAATTATTGGTCTATTAGAGGCTAGTCGAGTTAATGAATGGATTGTCACTGAAAAACTTGGAGATGCTCTCAAGGGTAAAGGTGGGGGTAAAGCACCCAAGAAGATTCGATTCAGGATTGGAGACAGAATTCACATGTTGGAACTTCTAGTTGGATTCTACCTCTTCTTCTGTGGCTGCTATGATGTTATGTTCGGGAAAAACCGGTTCTACATATTCCTATACATTCAATCAATTGCCTTCTTCATCATGGCATTTGGATATGTTGGCACAATCGTTCCCACCTCTTAA 1575 0.4527 MMEAFQGTRDDISLQVGMIWSQVKEPVMVPLLRVAVFVCLAMSLMMLVERVYMGLVICLVKLFGRRPEKRYKWEPMKEDVELGNSSYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQILDDSTDPSIKELVQMECSRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFLWRTVPFLVNNPELGLVQARWKFVNANECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGLWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLANLKVKNELPSTLKAYRYQQHRWSCGPANLFKKMVMEIMRNKKVSLWKKIYVVYSFFFVRKVVAHINTFVFYCIVLPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENTMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKGKGGGKAPKKIRFRIGDRIHMLELLVGFYLFFCGCYDVMFGKNRFYIFLYIQSIAFFIMAFGYVGTIVPTS* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g01120 524 FunFam Glucomannan 4-beta-mannosyltransferase 9 79 307 - -
Lapu7g01120 524 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 14 519 - -
Lapu7g01120 524 SUPERFAMILY Nucleotide-diphospho-sugar transferases 85 364 IPR029044 -
Lapu7g01120 524 Pfam Glycosyl transferase family group 2 181 380 IPR001173 -
Lapu7g01120 524 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 303 IPR029044 -
Lapu7g01120 524 CDD CESA_CaSu_A2 88 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g01120 Lapu-Chr7 22609730 22616519 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g01120 3 523 Miscellaneous Gene Families AT5G03760 78.927 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g01120 K13680 - gmx:100782772 952.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g01120 7 22609730 22616519 Lapu11g00374 11 6799231 6805234 ECH
Lapu7g01120 7 22609730 22616519 Lapu7g01120 7 22609730 22616519 ECH
Lapu6g00596 6 6206353 6212209 Lapu7g01120 7 22609730 22616519 PCT