Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00374 ATGGTTGATTCAGAGCCAAAGTTCTTCATCCCGGACTCAATCCAGGGTGTGAATTTCGATGTCACGGCGCAGATGAGGATGGTGTGGGAGGTGATAAAGGCGCCACTGATCGTGCCGCTGATGAACGTGGCGGTGTACATTTGCCTCGCCATGGCCCTCATGCTCTTCATGGAGAGGGTCTACATGGGCATTGTCATCATCCTCGTTAAACTCTTCTGGAAGAAACCCCACCAACGCTACAAGTTCGAACCCCTCCAAGAAGACGAGGAACTCGGCAACACCAACTTCCCCGTAGTCCTTGTTCAGATTCCCATGTTCAATGAAAAAGAGGTGTACAAGGTGTCAATTGGAGCAGCTTGTAATCTCTCATGGCCAGCGGATCGTCTAGTGATTCAAGTGCTCGACGATTCAACTGACCCTACCATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGCAAGCAAAGGGATAAACATAACGTACCAAATCAGAGAGACTCGAGGGGGCTACAAAGCGGGTGCTCTAAAAGAAGGTCTAAAACGTAGCTATGTGAAACATTGTGAGTACGTGGCAATTTTCGATGCTGATTTTCGTCCAGAACCAGATTTTCTCAGACGATCCATTCCTTTCTTGGTGGGCAACCCCGACATTGCCCTTGTTCAAGCTCGGTGGAGATTTGTGAATGCTGATGAGTGTTTATTGACAAGGATGCAAGAGATGTCCCTGGATTACCATTTCACTGTAGAGCAAGAAGTTGGGTCAGCCACTCATGCTTTCTTCGGTTTCAACGGAACTGCTGGTATTTGGAGAATAGCTGCTATTAATGAAGCTGGAGGGTGGAAAGATAGAACAACAGTGGAAGATATGGACCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTTGGTGACCTCCAGGCCAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTTAGATTCCAGCAGCACCGATGGTCTTGTGGTCCTGCTAATTTGTTCCGCAAAATGGTTATGGAGATAGTAAGGAACAAGAAAGTCAGGTTTTGGAAGAAAGTGTACGTTATATACAGCTTCTTCTTTGTTCGCAAAATCATAGCTCACATGGTCACCTTCTTCTTCTACTGTGTTGTGATTCCCCTCACAATTTTGATTCCTGAGGTTCATGTTCCAATATGGGGAGCTGTTTATATTCCTTCTGTCATCACAATTCTCAATTCAGTTGGCACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCTTTGCACCGTACCAAGGCAACATTTATAGGTCTCTTAGAGTATGGGAGAGCTAATGAATGGGTTGTGACCGAAAAACTTGGTGACTCTGTCAACAATAATAGCAAGAATAAATCAGGAGATGCTGCCAAGAAGAATAATGTCACCAAGGCTCCCAAAAAGACTCGATCCAAATTTGTTGAAAGACTTAATTTACTGGAGCTGGGATTTGCTGCATTCCTCTTCTTATGTGGATGCTATGATTTTGTGCATGGGAAGCACAACTATTTCATCTACCTCTTCCTTCAGACCATAACATTCTCAATTGTAGGATTTGGCTACGTTGGCACCATCGTGTAA 1629 0.4494 MVDSEPKFFIPDSIQGVNFDVTAQMRMVWEVIKAPLIVPLMNVAVYICLAMALMLFMERVYMGIVIILVKLFWKKPHQRYKFEPLQEDEELGNTNFPVVLVQIPMFNEKEVYKVSIGAACNLSWPADRLVIQVLDDSTDPTIKQMVEMECQRWASKGINITYQIRETRGGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRSIPFLVGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGIWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCVVIPLTILIPEVHVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVNNNSKNKSGDAAKKNNVTKAPKKTRSKFVERLNLLELGFAAFLFLCGCYDFVHGKHNYFIYLFLQTITFSIVGFGYVGTIV* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00374 542 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 540 - -
Lapu11g00374 542 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
Lapu11g00374 542 Pfam Glycosyl transferase family group 2 190 393 IPR001173 -
Lapu11g00374 542 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 377 IPR029044 -
Lapu11g00374 542 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 316 IPR029044 -
Lapu11g00374 542 CDD CESA_CaSu_A2 97 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00374 Lapu-Chr11 6799231 6805234 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00374 1 542 Miscellaneous Gene Families AT5G22740 81.066 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00374 K13680 - gmx:100791645 1050.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00374 11 6799231 6805234 Lapu11g00374 11 6799231 6805234 ECH
Lapu6g00596 6 6206353 6212209 Lapu11g00374 11 6799231 6805234 ECH
Lapu7g01120 7 22609730 22616519 Lapu11g00374 11 6799231 6805234 ECH