Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu7g00452 ATGGCTCCTGTTATGACCACCGTGAAAGCCAAAGTCACCGACGCCGAAGCTAACACTGCCGAGGGTAGTGGCCGTGCCTACGTGACCTTCCTCGCCGGAAATGGTGACTATGTGAAAGGTGTGGTTGGATTGGCCAAAGGTCTGAGGAAGGTGAAGAGCCTGCACCCTCTGGTGGTTGCAGTGTTACCAGATGTTCCTGAAGAGCATCGTAACATTCTCATCTCACAAGGCTGCATTGTCAGAGAGATTGAGCCCGTGTACCCTCCAGAGAATCAAACTCAGTTTGCCATGGCATATTACGTCATCAACTACTCCAAGCTACGAATTTGGGAGTTTGTGGAGTACACTAAGATGATTTACCTGGATGGTGATATCCAAGTGTTTGACAACATTGACCACTTGTTCGACTTGCCTGATGATTACTTCTACGCGGTCATGGACTGTTTCTGTGAGCCCACTTGGGCCCACACTCAACAGTATGAGATCAGTTACTGCCAGCAGTGTCCTGATAAGGTTCAGTGGCCCACTAACCATGGGCCCAGGCCTCCTCTCTATTTCAATGCTGGTATGTTTGTTTACGAGCCCAATCTATCTACCTACCATGACCTCCTTCAAACAGTACAAGTCACCAAGCCCACTTCCTTTGCTGAACAGGATTTTTTGAACATGTACTTCAAGGATAAATATAGGCCAATTCCTAATGTGTACAATCTTGTGCTGGCCATGTTATGGCGTCATCCTGAGAATGTTGAGCTTGAGAAAGTTAAAGTGGTTCACTACTGTGCTGCGGGATCTAAGCCTTGGAGGTACAGTGGGAAGGAGGAGAATATGGAAAGAGAAGATATAAAGATGTTAGTGAAGAAGTGGTGGGATATATATGAGGATGAGAGTTTGGACTACAACAATTCCCTCAATGTGGAAAGGTTCACTGAGGCACTTTCGGAGGCTGGTGGACTCAATTTCATTCCTGCTCCATCTGCTGCTTAG 987 0.4701 MAPVMTTVKAKVTDAEANTAEGSGRAYVTFLAGNGDYVKGVVGLAKGLRKVKSLHPLVVAVLPDVPEEHRNILISQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYTKMIYLDGDIQVFDNIDHLFDLPDDYFYAVMDCFCEPTWAHTQQYEISYCQQCPDKVQWPTNHGPRPPLYFNAGMFVYEPNLSTYHDLLQTVQVTKPTSFAEQDFLNMYFKDKYRPIPNVYNLVLAMLWRHPENVELEKVKVVHYCAAGSKPWRYSGKEENMEREDIKMLVKKWWDIYEDESLDYNNSLNVERFTEALSEAGGLNFIPAPSAA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu7g00452 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 298 IPR029044 -
Lapu7g00452 328 CDD GT8_Glycogenin 25 295 - -
Lapu7g00452 328 Pfam Glycosyl transferase family 8 29 270 IPR002495 GO:0016757
Lapu7g00452 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 23 302 IPR029044 -
Lapu7g00452 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 15 296 - -
Lapu7g00452 328 FunFam Hexosyltransferase 23 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu7g00452 Lapu-Chr7 5165270 5166606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu7g00452 1 328 Glycosyltransferase AT1G56600 74.556 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu7g00452 K18819 - gmx:548050 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu7g00452 7 5165270 5166606 Lapu7g00452 7 5165270 5166606 ECH
Lapu6g00887 6 9089660 9091632 Lapu7g00452 7 5165270 5166606 ECH
Lapu6g00968 6 9861972 9864502 Lapu7g00452 7 5165270 5166606 PCT