Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00968 ATGACACCTAACATCACCACCGTCACAGTCCATGGCACCACTGAGCAACCCAAAGGTCGCAGTGGGCGTGCCTTTGTGACTTTCCTTGCTGGGAACGGTGATTACGTAAAGGGTGTTGTGGGTTTGGCCAAAGGGTTGAGAAAGGCCAAAAGCAGGTACCCTTTGGTGGTTGCTGTGTTACCTGATGTTCCTGAAGAACATCGAGCGATTCTGAAATCTCAAGGTTGCACTGTCAGGGAGATCGAACCAGTGTACCCGCCTGAGAATCAGACACAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTACGTATTTGGGAGTTTGTAGAGTACACAAAGATGATATATCTAGATGGTGACATCCAGGTTTTTGGAAACATTGACCACTTGTTTGATCTTCCTGATAATTATTTCTATGCGGTCATGGATTGTTTCTGCGAGAAGACTTGGAGCCACAGCCCTCAGTATCAAATTGGTTACTGCCAACAGTGCCCTGATAAAGTTCAGTGGCCCTCTCACTTGGGTTCCAAACCTCCTCTATATTTCAATGCTGGCATGTTCGTCTATGAGCCTAATCTTGTGACTTACCGTGATCTACTTCAAACAGTTCAAATCACCAGACCTACTTCTTTTGCTGAGCAGGACTTTCTGAACATGTACTTCAAGGACAAGTACAAGCCTATACCAAACTTGTACAATCTTGTATTGGCCATGTTGTGGCGTCACCCCGAGAACGTTGAACTTGACAAAGTTCAAGTGGTTCATTATTGCGCTGCTGGGTCTAAGCCTTGGAGATTCACGGGCAAGGAGGAGAACATGGAGAGGGAAGATATCAAGATACTTGTGAAGAAGTGGTGGGAGATATATGAAGATGAGACACTAGACTACAATAATAACAACAATTCTGTTAACGTGGAACATTTGACTTCAGCACTACTGGAGGCTGGTGGCATTCCGCTTGTGTCAGCCCCTTCTGCTGCATAA 990 0.4535 MTPNITTVTVHGTTEQPKGRSGRAFVTFLAGNGDYVKGVVGLAKGLRKAKSRYPLVVAVLPDVPEEHRAILKSQGCTVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYTKMIYLDGDIQVFGNIDHLFDLPDNYFYAVMDCFCEKTWSHSPQYQIGYCQQCPDKVQWPSHLGSKPPLYFNAGMFVYEPNLVTYRDLLQTVQITRPTSFAEQDFLNMYFKDKYKPIPNLYNLVLAMLWRHPENVELDKVQVVHYCAAGSKPWRFTGKEENMEREDIKILVKKWWEIYEDETLDYNNNNNSVNVEHLTSALLEAGGIPLVSAPSAA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00968 329 PANTHER GLYCOGENIN SUBFAMILY MEMBER 18 293 - -
Lapu6g00968 329 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 297 IPR029044 -
Lapu6g00968 329 FunFam Hexosyltransferase 21 299 - -
Lapu6g00968 329 CDD GT8_Glycogenin 23 293 - -
Lapu6g00968 329 Pfam Glycosyl transferase family 8 27 268 IPR002495 GO:0016757
Lapu6g00968 329 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 295 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00968 Lapu-Chr6 9861972 9864502 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00968 1 329 Glycosyltransferase AT1G56600 75.221 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00968 K18819 - gmx:100800249 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00968 6 9861972 9864502 Lapu6g00968 6 9861972 9864502 ECH
Lapu6g00968 6 9861972 9864502 Lapu7g00452 7 5165270 5166606 PCT