Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu6g00887 ATGGCCCCCGAGCTTGTCCCCACCCTACCAAAATCCCTTACCACATTCACCAGACCCTCTACTCTCCCACCGCGTGCTTACGTCACATTCCTTGCCGGAAATGGTGACTACGTAAAGGGGGTGGTTGGTCTCGCCAAAGGGTTGCGAAAGGTGAAATCCGCATACCCATTGGTGGTGGCTGTCCTTCCCGATGTGCCGGAAGAGCACCGTAAGATCCTTGAATCGCAGGGTTGCATAGTCCGTGAGATTGAACCTGTTTACCCACCCGAAAACCAGACTCAGTTTGCTATGGCATATTACGTCATTAATTACTCCAAACTCCGTATATGGGAGTTTGTGGAATACTCAAAGATGATATACTTGGACGGAGACATTCAGGTATACCAAAACATAGATCACTTGTTTGACCTACCTGATGGTAACTTCTATGCTGTGATGGACTGTTTCTGCGAGAAGACATGGAGTCACACCCCTCAGTACAGGGTGGGGTACTGCCAGCAGTGTCCCAACAAAGTGCAGTGGCCCACCGAGTTGGGCCAGCCCCCTGCTCTTTACTTCAATGCCGGCATGTTTGTCTTTGAACCTAGCATGGCCACTTACCACGACCTATTGGATACTGTGCAAGCTACTACACCCACATCTTTTGCTGAACAAGACTTCTTGAACATGTACTTCAAGGACATTTACAGGCCAATTCCTTTGTCCTACAACCTTGTCCTAGCCATGCTGTGGCGTCACCCAGAGAATGTTAACCTTGAGGAAGTCAAGGTTGTTCACTACTGTGCAGCGGGGTCGAAGCCCTGGAGATATACTGGAAAAGAAGAGAACATGCAGAGAGAGGACATAAAGATGCTGGTGAAGAAATGGTGGGATATATATAATGATGCTTCTCTTGACTACAAGCCAGTGGGTGCAAGAGAAGCTCAAGCGGATGGTGTTGGTTTTGATCCATTGGTTTGTGGTCTTCAACTGGCTGCACCATCAGCAGCCTAG 993 0.4884 MAPELVPTLPKSLTTFTRPSTLPPRAYVTFLAGNGDYVKGVVGLAKGLRKVKSAYPLVVAVLPDVPEEHRKILESQGCIVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVYQNIDHLFDLPDGNFYAVMDCFCEKTWSHTPQYRVGYCQQCPNKVQWPTELGQPPALYFNAGMFVFEPSMATYHDLLDTVQATTPTSFAEQDFLNMYFKDIYRPIPLSYNLVLAMLWRHPENVNLEEVKVVHYCAAGSKPWRYTGKEENMQREDIKMLVKKWWDIYNDASLDYKPVGAREAQADGVGFDPLVCGLQLAAPSAA* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu6g00887 330 PANTHER GLYCOGENIN SUBFAMILY MEMBER 21 296 - -
Lapu6g00887 330 SUPERFAMILY Nucleotide-diphospho-sugar transferases 27 300 IPR029044 -
Lapu6g00887 330 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 24 300 IPR029044 -
Lapu6g00887 330 Pfam Glycosyl transferase family 8 29 271 IPR002495 GO:0016757
Lapu6g00887 330 CDD GT8_Glycogenin 25 296 - -
Lapu6g00887 330 FunFam Hexosyltransferase 23 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu6g00887 Lapu-Chr6 9089660 9091632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu6g00887 1 330 Glycosyltransferase AT1G56600 71.893 1.46e-180 501
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu6g00887 K18819 - gmx:100809287 607.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu6g00887 6 9089660 9091632 Lapu6g00887 6 9089660 9091632 ECH
Lapu6g00887 6 9089660 9091632 Lapu7g00452 7 5165270 5166606 ECH