Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu5g00628 ATGACTTGGAAAAGCAGGGGAGACCTGCTTCCCAAAAGTGTCATGTCTCAGAAATGGGTGATTTTTCTCTGTATTGGAAGTTTCTGTGCTGGGATGGTTTTCACCAACAGCAGGATGTGGACTATTCCTGAACCTAAAGGACTTGGACGGACAACAGCTATGGAAGCTGAAAAATTGAATGTAGTTTCAGAGGATTGTAATTCAAGAATTTTGCAAGAGAAGGAAGTGAAGCGTGAAACTAAAGGCATCTATGGAGAGGTTTTCAAGACACAAAATGCCATACAAACCCTTGATAAGACTATTTCAAACTTGGAGATGGAATTAGCAGCTGCAAAGGCAGCTCAGGAGTCTGTACGAAGTGGTGCTCCAGTACCAGAAGATATCAAGATGAGTAGTGAATCATCTGGTAGGAGAAGGTACCTAATGGTCGTTGGAATCAACACTGCTTTCAGCAGCAGAAAAAGAAGAGACTCAGTTCGTGAGACATGGATGCCTCAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAGGGAATCATCATCCGATTTGTAATTGGTCATAGTGCAACATCAGGGGGTATCCTAGACAGAGCTATTGAAGCAGAAGATAAAAAGCATGGAGATTTTCTGAGACTGGATCATGTTGAAGGATACCTTGAATTGTCAGCAAAGACAAAGACCTACTTTGCCACTGCTGTTAACTTGTGGGATGCTGACTTCTATATCAAAGTTGATGACGATGTTCATGTAAATATAGCCACACTAGGACGAACTCTAGTGAGACACCGATCAAAACCACGGGTGTACATTGGATGCATGAAATCTGGGCCTGTTCTTTCTCAAAAAGGGGTAAGGTACCACGAGCCAGAATACTGGAAATTTGGAGAGGCTGGAAACAAGTATTTCCGTCATGCCACGGGACAGTTGTATGCCATTTCAAAAGATCTGGCTTCATACATTTCAAATAACAAGCACGTTCTCCACAAGTATGCCAATGAGGATGTCTCATTAGGCTCTTGGTTTATTGGACTTGATGTGGACCACATAGATGATCGAAGACTCTGCTGTGGTACACCACCAGATTGTGAATGGAAAGCACAGGCAGGCAATGTTTGTGTTGCTTCATTTGATTGGACTTGCAGTGGAATTTGCAGGTCTGCTGAAAGGATCAAAGAAGTCCACAAGAGATGTGGGGAAGGTGAGAAAGCTTTGTGGAGTGCCTCTTTCTAG 1230 0.4309 MTWKSRGDLLPKSVMSQKWVIFLCIGSFCAGMVFTNSRMWTIPEPKGLGRTTAMEAEKLNVVSEDCNSRILQEKEVKRETKGIYGEVFKTQNAIQTLDKTISNLEMELAAAKAAQESVRSGAPVPEDIKMSSESSGRRRYLMVVGINTAFSSRKRRDSVRETWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDKKHGDFLRLDHVEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIATLGRTLVRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISKDLASYISNNKHVLHKYANEDVSLGSWFIGLDVDHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHKRCGEGEKALWSASF* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu5g00628 409 Coils Coil 94 114 - -
Lapu5g00628 409 FunFam Hexosyltransferase 134 355 - -
Lapu5g00628 409 Pfam Domain of unknown function (DUF4094) 16 113 IPR025298 -
Lapu5g00628 409 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 98 350 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu5g00628 409 Pfam Galactosyltransferase 154 351 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu5g00628 409 Gene3D - 137 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu5g00628 Lapu-Chr5 5908378 5912851 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu5g00628 1 409 Glycosyltransferase AT1G05170 77.262 0.0 680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu5g00628 K20855 - gmx:100793931 799.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00628 5 5908378 5912851 Lapu5g00628 5 5908378 5912851 ECH
Lapu5g00628 5 5908378 5912851 Lapu3g00136 3 1575114 1581879 ECH
Lapu5g00628 5 5908378 5912851 Lapu11g00237 11 5299759 5304544 PCT