Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00237 ATGCAGTTTCATTGTATAAGGGTATTGCCTTGGCAACCAGTAAAGTGGTTCTTATGGTACTCTTTTCTGATGAGAAATGTTAATATTCATAACAGGATATGGACTATCCCTGAAAACAACAAAGGACTAGCCCGACCAACGGCTGCAGAAGCTGATAAATTGAATGTAGTTTCAGAAGGTTGCAATTCCAGAATTTTGCAAGAATTGGAAATGAAGCGCGATAAAGACGTTTATGGTGAAGTTTACAAGAGTCATAATTCCATTCAAACATTAGACAAGACTATTTCAAACTTAGAGATGGAATTGGCTGCTGCAAGGGCAACTCAGGAGTCTCTAAGAAGTGGTGCTCCTGTTTCAGATGATATAAGAATGAGTGAATCATCTGGTAAGAGAAAATACCTTATGGTCATTGGTATTAATACTGCATTTAGCAGCAGGAAAAGAAGGGATTCTGTTCGTGCCACTTGGATGCCACAAGGTGAGAAAAGAAAGAAGCTAGAGGAGAAGGGCATCATCATCCGCTTTGTAATTGGACACAGTGCTACATCAGGGGGTATTCTTGACAGAGCTATTGAAGCTGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCAGCAAAAACAAAAACCTACTTTGCCACTGCTGTGAACTTGTGGGATGCTGATTTCTATGTCAAAGTTGATGATGATGTTCATGTAAATATAGCAACTCTGGGAGAAACTCTAGTTAGACACCGATCCAAACCACGGATATACATTGGATGCATGAAATCTGGGCCAGTCCTATCTCAAAAAGGGGTAAGATACCATGAACCCGAGTACTGGAAATTTGGAGAGGCTGGAAACAAGTATTTCCGACATGCCACAGGGCAGTTGTATGCCATTTCAAACGATTTGGCTACGTACATATCAATTAACCAGGATGTTCTTCACAAGTATGCCAACGAGGATGTGTCACTAGGATCTTGGTTTATTGGACTTGATGCGGAGCATATAGATGATCGAAGACTTTGCTGTGGCACTCCTCCAGTTGATCACTTCTTTCTTGCAGATTGTGAGTGGAAGGCCCAAGCAGGCAACATTTGTGTTGCATCATTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCTGACAGGATTAAAGAGGTACATAGGAGGTGTGGAGAGGGTGAGAATGCTTTGTGGAGTGCCTCTTTCTAG 1227 0.4197 MQFHCIRVLPWQPVKWFLWYSFLMRNVNIHNRIWTIPENNKGLARPTAAEADKLNVVSEGCNSRILQELEMKRDKDVYGEVYKSHNSIQTLDKTISNLEMELAAARATQESLRSGAPVSDDIRMSESSGKRKYLMVIGINTAFSSRKRRDSVRATWMPQGEKRKKLEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFATAVNLWDADFYVKVDDDVHVNIATLGETLVRHRSKPRIYIGCMKSGPVLSQKGVRYHEPEYWKFGEAGNKYFRHATGQLYAISNDLATYISINQDVLHKYANEDVSLGSWFIGLDAEHIDDRRLCCGTPPVDHFFLADCEWKAQAGNICVASFDWSCSGICRSADRIKEVHRRCGEGENALWSASF* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00237 408 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 92 341 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu11g00237 408 Gene3D - 130 343 - -
Lapu11g00237 408 Pfam Galactosyltransferase 147 342 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu11g00237 408 Coils Coil 88 108 - -
Lapu11g00237 408 Pfam Domain of unknown function (DUF4094) 28 107 IPR025298 -
Lapu11g00237 408 SUPERFAMILY PspA lactotransferrin-binding region 46 107 - -
Lapu11g00237 408 FunFam Hexosyltransferase 127 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00237 Lapu-Chr11 5299759 5304544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00237 31 408 Glycosyltransferase AT1G05170 79.211 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00237 K20855 - gmx:100794838 725.702
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00237 11 5299759 5304544 Lapu11g00237 11 5299759 5304544 ECH
Lapu11g00237 11 5299759 5304544 Lapu3g00136 3 1575114 1581879 ECH
Lapu5g00628 5 5908378 5912851 Lapu11g00237 11 5299759 5304544 PCT