Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00136 ATGTCTATGAAGAGCAAGGGAGGAGCTGCAGAACTGAGTGCAAGGAATGTCCTGCATAGGAAATGGGCCCTTCTGCTCTGTGTGGCAAGCTTCTGTGCTGGAATGTTCTTCACAAATAGGATATGGTCGATGCCTGAATATATAGAAATTTCAAGGACAACTAGCGAGATTGAAAGAATAAAATTAAACTCTGAGGGTTGTAATCTAAATCCAGTTGCAAGGCCAAACTTGAATTACAGTCAAGTGGGAGTTTCAAATGCACAGAACGTTGTAAAAAATGATGTCAAAAGACCAAGGAAGTCAGAGACAATTGAATCAACTACTAGGAAAAAATATTTCATGGTTATAGGGATCAATACAGCTTTCAGTAGCAGGAAGCGAAGAGATTCTGTTCGTACAACTTGGATGCCACGAGCCGACGAAAGAAAGAAGTTGGAGGAAGAAAAGGGCATAATCATACGATTCGTCATAGGTCACAGTTCTACATCTGGTGGCATTCTAGACAAAGCTATCGAAGCAGAGGAGAGGCTTCATGCTGACTTTTTGAGGCTGAACCATGTGGAGGGATACCTAGAACTATCAGCTAAGACAAAGACCTACTTTTCAACTGCTGTTGCCTTGTGGGATGCGGAATTTTATGTTAAAGTTGATGATGATGTTCATGTCAATTTAGCAACACTTGGATTGACTTTGAGTATGCACCGAATGAAACCTCGGGTGTATATTGGGTGCATGAAATCCGGTCCTGTCCTTGCTCAGAAGGGAGTGAAATACCATGAACCAGAATACTGGAAGTTTGGAGAGGTGGGAAACAAGTACTTCCGTCATGCTACAGGACAACTATATGCCATTTCGCAAGATTTGGCTGCTTATATATCAATAAATCAGGATGTGCTACATAAATATGCCAATGAAGATGTGTCGTTGGGGTCTTGGTTTATTGGTTTAGACGTGGATCATGTTGATGATAGGAGAATGTGTTGTGGCACACCCCCTGATTGCGAGTGGAAGTCGCAGGCCGGCAACATTTGTGTTGCTTCGTTTGATTGGAAATGCAGTGGAATCTGCAGGTCTGTTGAGAGGATGAAAGAAGTTCACCTGCGTTGTGGGGAGGATGAAAACGCTTTGTGGAGTGCTACCTTGTAA 1146 0.4276 MSMKSKGGAAELSARNVLHRKWALLLCVASFCAGMFFTNRIWSMPEYIEISRTTSEIERIKLNSEGCNLNPVARPNLNYSQVGVSNAQNVVKNDVKRPRKSETIESTTRKKYFMVIGINTAFSSRKRRDSVRTTWMPRADERKKLEEEKGIIIRFVIGHSSTSGGILDKAIEAEERLHADFLRLNHVEGYLELSAKTKTYFSTAVALWDAEFYVKVDDDVHVNLATLGLTLSMHRMKPRVYIGCMKSGPVLAQKGVKYHEPEYWKFGEVGNKYFRHATGQLYAISQDLAAYISINQDVLHKYANEDVSLGSWFIGLDVDHVDDRRMCCGTPPDCEWKSQAGNICVASFDWKCSGICRSVERMKEVHLRCGEDENALWSATL* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00136 381 Gene3D - 102 327 - -
Lapu3g00136 381 Pfam Galactosyltransferase 126 323 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu3g00136 381 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 99 322 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lapu3g00136 381 FunFam Hexosyltransferase 106 327 - -
Lapu3g00136 381 Pfam Domain of unknown function (DUF4094) 19 91 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00136 Lapu-Chr3 1575114 1581879 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00136 1 381 Glycosyltransferase AT1G05170 64.634 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00136 K20855 - gmx:100810168 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00136 3 1575114 1581879 Lapu3g00136 3 1575114 1581879 ECH
Lapu5g00628 5 5908378 5912851 Lapu3g00136 3 1575114 1581879 ECH
Lapu11g00237 11 5299759 5304544 Lapu3g00136 3 1575114 1581879 ECH