Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu4g00083 ATGGAAATCCAACCAAGCCCAAGCCCAAGCCCACAACTGGCGGCGGCAAGGAAGCTCTGGAACGTAGTACGCATAGTGTTCCTGATGTTGAGAAAAGGCATAGCCAAGAGCAAACACGCCGTTGACTTCAACTTCAACAGCGGCAAACTCGCCGCCGCCAAAGCCATCCTCCACCTCCAGCGCCACCACCACAACCGCCACGACGCCATTTACCCCCACCGCGACTACGAGTTCAGCTGCAGCAATAGCCCCGCCGCCACCTTTCCCTTCCACGTCATCAAACGCAGCAAAAACCGAACCCGGTTCCCTCAGTACGACGACGTTTCCAGCGTTCAGAAAGTGCTGGAGATTCTCAACAACAATAACCAGATGGAGGGTTCTCCTTTGGTGAAGAGTCCGATTGGGAGGAAAGTGAGAATCACGGACTCTCCCTTCCCTCTCAAGGAGGAAGAAGAGGACAACCAGGTTGACGTGGCGGCTGAGGAGTTCATCAAGAGGTTCTACAAGGACCTCAACTTGCAGCAGAAAATGGCTGCTATTGAATCACCCTATCATTCTAACTTCTGGGGCAGATGA 576 0.5365 MEIQPSPSPSPQLAAARKLWNVVRIVFLMLRKGIAKSKHAVDFNFNSGKLAAAKAILHLQRHHHNRHDAIYPHRDYEFSCSNSPAATFPFHVIKRSKNRTRFPQYDDVSSVQKVLEILNNNNQMEGSPLVKSPIGRKVRITDSPFPLKEEEEDNQVDVAAEEFIKRFYKDLNLQQKMAAIESPYHSNFWGR* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu4g00083 191 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 14 182 - -
Lapu4g00083 191 Pfam Cotton fibre expressed protein 153 175 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu4g00083 Lapu-Chr4 770577 771393 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu4g00083 - - vra:106768173 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu4g00083 4 770577 771393 Lapu10g00536 10 7685608 7686907 ECH
Lapu4g00083 4 770577 771393 Lapu4g00083 4 770577 771393 ECH
Lapu3g03772 3 61161779 61163054 Lapu4g00083 4 770577 771393 PCT