Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g03772 ATGGAAATTGAGGGAAACACGCAGGTGGTGGCGAAGAAGGTATGGAACATCGTACGTGTGATGTTCTTCATGTTGAGAAATGGCATAGCCAAGAGCAAAATAATGGTGGAGTTCCATCTCATGCTGAAGCGTGGGAAGAAGGCCTTGGTCAACAACCTCATGCTCAACCACCACTATTACATGGCCGCTTTCACCTCCCGCTCCCACCACAACCACACCACCTTCATCTCCCCACGCGACTACGAGTTCAGCTGCAGCAACAGCCCCGCCATCCCCTTCCACGCCCTCAAACGCACCCACAAAAGCCACCGCTTCTCCAAACCCTCCCAATACCACGACGTTTCCACCCTCTCCGCCGTTCAGAAGGTTCTTGAAATCCTCAACAACGAAACCAATAGCTCCCCCTTCCCCTCCTTCGGAAAAAGCCCTGTTGGCAAACAACTCAGAGTCACCGACTCACCCTTCCCTCTCAAAGACGACGGGGATAGCCAAGTCGACGTGGCAGCAGAAGAGTTCATTAAGAAGTTCTACAAAGACCTCAACTTGCAGAAAAAAATGGCATATCTTGAGTCCCCATACCATAATTCATGGAGCAGATGA 600 0.5117 MEIEGNTQVVAKKVWNIVRVMFFMLRNGIAKSKIMVEFHLMLKRGKKALVNNLMLNHHYYMAAFTSRSHHNHTTFISPRDYEFSCSNSPAIPFHALKRTHKSHRFSKPSQYHDVSTLSAVQKVLEILNNETNSSPFPSFGKSPVGKQLRVTDSPFPLKDDGDSQVDVAAEEFIKKFYKDLNLQKKMAYLESPYHNSWSR* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g03772 199 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 8 192 - -
Lapu3g03772 199 Pfam Cotton fibre expressed protein 163 195 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g03772 Lapu-Chr3 61161779 61163054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g03772 - - gmx:100305871 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g03772 3 61161779 61163054 Lapu10g00536 10 7685608 7686907 ECH
Lapu3g03772 3 61161779 61163054 Lapu3g03772 3 61161779 61163054 ECH
Lapu3g03772 3 61161779 61163054 Lapu4g00083 4 770577 771393 PCT