Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1302 ATGTACATGTGCCTGTATGGATTTGATTCATTTCAGAGTTCTGCTGGTGAATGCCAATCAGATCTGTTTGTCAAATTGGGACATCTAAAGTTTCGTACGCAAACTGGTGTCAACACAATGGAAAATGAACCTGAGCAAATTGATGCAGGATATCCTAACAAAAATACTGTTGCATGCATGATCAATGCAGAAATTGGTGCTGTTTTGGCTGTCATGCGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGATCAGTTGGAGCATTCCCTTGTTCAGTCTTTGAAGTCATTAAGGAGGCAAATTTTTTCGTGGCAGAATCAATGGCTTGTCATCAACCCTGCTTTGTATCTCCAGCCTTTTCTGGATGTGATTAAATCAGAGGAAACTGGTGCACCAATTACTGGCGTTGCTCTGTCTTCTGTTTACAAGATCTTAACTCTGGATGTGATTGATCAAAATACTGTCAAGGTTGGGGATGCCATGCAGTTGGTCGTTGATGCTGTCACAAGTTGCAGATTTGAGGTGACTGATCCTGGATCAGAAGAAGTGGTATTGATGAAGATCTTACAAGTTCTTCTAGCTTGTGTGAAAAGTAAAGCATCTGTAATGTTGAGTAACCAACATATTTGCACCATCGTGAATACTTGTTTCCGTATCGTTCATCAAGCAGGAACCAAAGGAGAGTTGTTGCAGCGGATAGCACGTTACACAATGCATGAACTTGTTCGGTGTATTTTCTCTCACCTTCAAGATATTAACAACACAGAACATGCATTGGTAAATGGGAGCAGTGCTTTAAAACAAGAGGCTGATGGGCTAAACAATGAACAAAATTCTACAAATAGACAATTGGAGAATGGGAGCTTGATTTCTGTAATTGATGGTCCACCCTTGACTTCTGGTATTTCTTCCAGTACTTTGAGTGATGTGACAGCAGCTGTTGTGGATGAAAACACAGCTATTGCTAGCAATGGCGTGGAGACCGATCTGCTTGCATTGCAGCTTACGACAGAACCATATGGGATTCCCTGTATGATGGAAATATTTCACTTCTTGTGTTCTTTGTTGAATGTTGCTGAGCACATGGGAATGAATCCTCGATCAAACACAATAGCATTTGATGAAGATGTGCCTCTTTTTGCCTTAACTTTGATTAATTCAGTCATAGAGTTGGGAGGGCCTTCTTTTCACCGACACCCTAGATTGCTGAGCTTAATTCAGGATGAGTTGTTCTGCAATCTTATGCAATTCGGTTTGTCAACGAGCCCCCTTGTACTTTCAATGGTGTGTAGCATTGTTCTAAATTTGTATCACCATCTTCGTACGGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAGTATGGAGCTTCATTTCAGCAACAAGAAGTTGCCATGGAGGCTCTTGTTGACTTTTGCAGGCAACAAACATTCACAGTGGAGATGTATGCTAACTTTGACTGTGACTTAACATGCAATAATGTCTTCGAAGACATTGCTAATTTGTTGTCCAAAAGTGCATTTCCTGTGAACACTCCACTGTCTTCCATGCATGTTCTTGCTTTGGATGGTCTTATTGCTGTCATGCAAGGAATAGCTGAAAGATTAGGCAATGGATCTTTAAGTTCAGAAAACTTTGCTGTGAATCTTGAAGAATATACTCCATTCTGGCAGGAAAGGTGTGAAAATTTCCGGGATCCAAATAATTGGGTTCCTTTTGTTTGCCGAAGAAAGTGCTTCAAGAAAATATTGATGATTGGTGCCGATCATTTTAACCATGATACTAAGAAAGGTCTTGAGTTTCTCCAAGGAACACATCTCTTACCTGACAAACTTGATCCCCAAAGTATTGCATGTTTTTTCAGATACACTCCTGGGCTGGATAAGAACCTCATTGGTGATTACCTAGGAAACCATGATGAATTCTGTGTTCAGGTTCTTCATGAATTCGCTAGAACATTTGATTTCAAAGAAATGACACTAGACAATGCCCTGCGACTATTTTTGGAGACTTTCAGACTTCCTGGAGAATCACAGAAGATACAAAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATTGCCACATATCCTTGCTAACAAGGATGCGGCTCTCTTGTTATCATACTCTATCATACTGCTTAATACAGATCATCACAATGCACAGGTAAAAAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCGAATAAATGGTGGCAATGATCTACCTAGAGATTACCTGTCAGAACTTTACCATTCAATTTGTAAGAATGAGATCCGCACAACTCGTGAGCAAGGTTCTGGATTTCCTGAAATGACTTCAAGTAAGTGGATTTATCTCTTGCACATGTCAAAAATCTCTGTTCCATTCATTGTTTCTGATTCCAGAGCATATCTTGATTATGATATGTTTGCTATGTTGTCTGGTCCTACAATTGCTGCCATTTCTGTGGTATTTGACAATGCTGAAAATGAGGAGGTATACCAAACTTGTATGGATGGATTCTTAGCTGTTGCAAAGATATCTGCACACTATCGTCTTGAAAATGTACTGGATGATTTGGTTGTGTCTCTTTGTAAATTCATTACTATTTTGGATCCATTATCTGTTGAGGAGTCAATCCTAGCCTTTGCAGATGACACAAAAGCAAGAATGACAACTGAGACAATCTTCACTATTGCGAATATGCATGGTGATTACATCCGCACTGGATGGAGGAATATTCTTGATTGTATCTTAAGATTGCACAAGTTAGGCCTTCTTCCTGCTTGTATGACCAGTGATGCGACTGAGTCGTCAGAGCTTTCTACAGAAACTGGTCATGGGAAGCGTAATGCTACCTTATCTTCAACTCATCTTCCTTCTGTTAGTACTCCAAAGAGATCCTTGGGATTAATGAGCAGATTTAGTCAACTCTTATATCTCGGTATTGAGGAGCCAAGATCAGTAATGTCTGAAGAAGAACTTGCTGCTCAACAGCGTGCTCTTCAAACAATACAGAAGTGCCGCGTTGACAGCATATTCACTGAGAGTAAATTTTTGCAAGCTGAATCCCTATTGCACCTTTCAAGAGCACTCATTAGTGCAGGAGAGCGACCTAAGAAAGGGTACAGAACATCTGAGGATGAAGATACTTCAGTTTTCTGCTTGGAGTTACTTGTGGCAACCACTCTGAATAATAGGGATAGGGTTGAACTTCTTTGGCAGGGCGTTTATGAGCACATATCCAATATTGTTCAGTCAACTGTGATACCATGTGCACTGGTAGAGAAGGCTGTTTTCGGACTCTTGAGGATTTGCCATCGCTTACTTCCGTACAAAGAGAACATTACTGAAGAACTTTTGAGATCCCTTCAACTTGTCCTGAAACTGGATGCACGTGTTGCTGATGCATATTATGAACAGATTACACAGGAAGTCAATCAACTCCTGAAGGCAAATGCTTCTCATATTAGATCTCAGTTAGGATGGCGAATGATTACGTCACTGCTTTCCATCACTGCTAGACACCTGGAAGCATCTGAGGCTGGATTTGATGCATTGTTGTTCATAATGTCAGATGGAGCCCACTTGCTTCCAGCTAATTATGTTCTCTGTGTGGATGCTGCAAAGCAGTTTGCAGAATCTCGTGTTGGAGAGGTAAAGCGGTCTGTAGTGGCACTTGATCTTATGGCAGGGTCTGTCAATTGTTTACAAAAGTGGACTAGTGATGCTAAGCAAGCAATGAAAGAAGAGGAAGTGGCAAAGATGTTGCAGGACATTGGAGAGATGTGGTTGAGGCTTGTACAGGGACTAAGTAAACTATGCTTGGACCTGAGAGTGGAAGTTAGAAACCATGCGTTGTTAGCACTGCGCAATTGCTTGACAGGATCTGTTGGGATTCATCTCTCACATGATTTGTGGTTACAATGTTTTAATGAAGTGATATTCACTGTGGTTGATGATCTGCTTGAAATTTCGCAGACACAGTCTCAAAAGGACTACCGGAACATGGAAGTAACACTTGTTCTTGCCTTGAAGCTCTTGTCTAAAGTTTTCCTCCATTTACTCCAAGACCTATCACAATTGACAGAATTCAACAAAATATGGTTGGGTGTACTGAATCGGTTGGAAGTATATATGAAGTTAAAAGTTAGGGGAAGGAGAAGCGAAAAGATTCAAGAGCTTGTGCCAGAACTTCTTAAGAACACTTTGCTTGTTATGAGAGCAGGGGGCATACTAGTGCGGAGCAATAGCGTAGATGGAAATAGTTTGTGGGAACTGACATGGCAGCACATAAATAACATTGCCCCATCATTGCAGTCTGAGGTATTCCCTGAGCAAGATTCAGAGGATTTGCAGCAGAAACAGTCTGAAACAGTTGGAAGTTCGGGACCTGGTGAAAACGTTTCTGTTCCTTCGAATGGAACTGTGGGCCAAGATGGCGGTGGTATTGGTTAA 4491 0.4081 MYMCLYGFDSFQSSAGECQSDLFVKLGHLKFRTQTGVNTMENEPEQIDAGYPNKNTVACMINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKSLRRQIFSWQNQWLVINPALYLQPFLDVIKSEETGAPITGVALSSVYKILTLDVIDQNTVKVGDAMQLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASVMLSNQHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLQDINNTEHALVNGSSALKQEADGLNNEQNSTNRQLENGSLISVIDGPPLTSGISSSTLSDVTAAVVDENTAIASNGVETDLLALQLTTEPYGIPCMMEIFHFLCSLLNVAEHMGMNPRSNTIAFDEDVPLFALTLINSVIELGGPSFHRHPRLLSLIQDELFCNLMQFGLSTSPLVLSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASFQQQEVAMEALVDFCRQQTFTVEMYANFDCDLTCNNVFEDIANLLSKSAFPVNTPLSSMHVLALDGLIAVMQGIAERLGNGSLSSENFAVNLEEYTPFWQERCENFRDPNNWVPFVCRRKCFKKILMIGADHFNHDTKKGLEFLQGTHLLPDKLDPQSIACFFRYTPGLDKNLIGDYLGNHDEFCVQVLHEFARTFDFKEMTLDNALRLFLETFRLPGESQKIQRVLEAFSERYYEQLPHILANKDAALLLSYSIILLNTDHHNAQVKKKMTEEDFIRNNRRINGGNDLPRDYLSELYHSICKNEIRTTREQGSGFPEMTSSKWIYLLHMSKISVPFIVSDSRAYLDYDMFAMLSGPTIAAISVVFDNAENEEVYQTCMDGFLAVAKISAHYRLENVLDDLVVSLCKFITILDPLSVEESILAFADDTKARMTTETIFTIANMHGDYIRTGWRNILDCILRLHKLGLLPACMTSDATESSELSTETGHGKRNATLSSTHLPSVSTPKRSLGLMSRFSQLLYLGIEEPRSVMSEEELAAQQRALQTIQKCRVDSIFTESKFLQAESLLHLSRALISAGERPKKGYRTSEDEDTSVFCLELLVATTLNNRDRVELLWQGVYEHISNIVQSTVIPCALVEKAVFGLLRICHRLLPYKENITEELLRSLQLVLKLDARVADAYYEQITQEVNQLLKANASHIRSQLGWRMITSLLSITARHLEASEAGFDALLFIMSDGAHLLPANYVLCVDAAKQFAESRVGEVKRSVVALDLMAGSVNCLQKWTSDAKQAMKEEEVAKMLQDIGEMWLRLVQGLSKLCLDLRVEVRNHALLALRNCLTGSVGIHLSHDLWLQCFNEVIFTVVDDLLEISQTQSQKDYRNMEVTLVLALKLLSKVFLHLLQDLSQLTEFNKIWLGVLNRLEVYMKLKVRGRRSEKIQELVPELLKNTLLVMRAGGILVRSNSVDGNSLWELTWQHINNIAPSLQSEVFPEQDSEDLQQKQSETVGSSGPGENVSVPSNGTVGQDGGGIG* 1497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1302 1496 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 346 507 IPR032691 -
Lan9g1302 1496 ProSiteProfiles SEC7 domain profile. 593 774 IPR000904 GO:0005085|GO:0032012
Lan9g1302 1496 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 39 1484 - -
Lan9g1302 1496 Coils Coil 266 286 - -
Lan9g1302 1496 CDD Sec7 593 776 IPR000904 GO:0005085|GO:0032012
Lan9g1302 1496 Gene3D - 669 786 IPR023394 -
Lan9g1302 1496 Pfam Sec7 domain 593 776 IPR000904 GO:0005085|GO:0032012
Lan9g1302 1496 MobiDBLite consensus disorder prediction 1457 1496 - -
Lan9g1302 1496 SMART sec7_5 589 776 IPR000904 GO:0005085|GO:0032012
Lan9g1302 1496 MobiDBLite consensus disorder prediction 949 976 - -
Lan9g1302 1496 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 39 1484 - -
Lan9g1302 1496 SUPERFAMILY ARM repeat 377 1387 IPR016024 -
Lan9g1302 1496 Gene3D - 586 668 - -
Lan9g1302 1496 SUPERFAMILY Sec7 domain 590 783 IPR035999 GO:0005085|GO:0032012
Lan9g1302 1496 MobiDBLite consensus disorder prediction 1465 1488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1302 Lan-Chr9 20299047 20305269 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1302 K18443 - gmx:100784083 2435.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1105 2 22340161 22347396 Lan9g1302 9 20299047 20305269 LSH
Lan9g1302 9 20299047 20305269 Lan4g0179 4 2929469 2936072 PCT