Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0179 ATGGGACGTCTAAAGCAGCATGGTATCAATGATGCAATAGAGGAGGAACCTGAGGAGTGTGATGTTACTGGTACTAATTCTAACAACTCAACTCTAGCATGTATGATCAATTCGGAAATTGGCGCTGTCTTGGCTGTTATGCGGAGAAATGTAAGATGGGGTGGCCATTATATGTCTGGCGATGATCAGCTGGAGCACTCTCTGATTCAGTCTTTGAAGGCGTTACGGAGACAAATCTTTTCGTGGCACCATCAGTGGAATGCTATCAACCCTGCCTTGTATCTCCAGCCGTTTTTAGATGTGATTCGATCTGATGAAGCTGGTGCAGCAATTACGAGTGTTGCTTTGTCGTCTGTTTACAAGATCTTGACTCTGGATGTGATTGATCACAATACGGTCAGTGTTGAGGATGCCATGCACTTGGTGGTTGATTCTGTCACTAGCTGCAGATTTGAGGTGCTCAATGCTTCTTCCGAAGAAGTTGTTTTGACAAAGATACTGCAAGTACTCCTAGCATGTATGAAAAATAAAGCATCTGTAATGATTAGTAATCAACATGTTTGCAACATAGTGAATACCTGTTTCCGTATAGTTCATCAAGCGGGAACCAAAAGTGAGTTGTTGCAGCAGATAGCGCGGTACACATTGCATGAACTTGTTAGATGTATTTTCTCTCACCTTCAAGATGTTGACAGCACAGAGCATGCATTGGTTAACGGAAGCTCTAGTTTGAAACTTGAGACTGGAGGCCCAAATAATGACCATATTTTTGGAGGTAGACAATCAGATAATGGGAGCCTGGGTAGTGAATATGATAATCAGCCATTGCCCACATACTCTTCTCCCAATGCTGCAAGTGTTGTCACGGCAACTGTGATGGACGAAAACACGGCTGTTGCTATTAGCGGCAATGAGAGTGCACCATATGACAGGCATCTTACTGAACCATATGGTGTTCCTTGCATGTTGGAAATATTTAGCTTCTTGTGTTCCTTGCTGAATGTTGTTGAACATACGGGAATGGGTCCTAGATCAAACACAATAGCATTTGATGAAGATATGCCTCTTTTTGCTTTAACTTTAATTAATTCAGCAATAGAACTTGGAGGGCCTTCTATTCGCCGTCACCCAAGGTTGCTGAGCTTAATTCAAGATGAATTGTTTCGTAATCTGATGCAGTTCGGTTTGTCAATAAGTCCGCTTATACTTTCAATGGTGTGTAGCATTGTTCTCAATCTGTATCATCATCTTCGTACAGAACTTAAATTACAGGTAGAAGCATTTTTTTCTTGTGTGATTTTGAGGCTTGCGCAAGGCAGATATGGGGCTTCGTACCAGCAGCAAGAGGTAGCCATGGAGTCCCTGGTTGACTTCTGCAGGCAAAAGACATTTATGGTAGATATGTATGCTAACTTTGACTGTGACATAACTTGCAGTAATGTCTTTGAAGAACTCACTAGTTTGTTGTCCAGGAGTGCATTTCCAGTGAACTGTCCATTGTCTGCCATGCATATTCTTGCTTTGGATGGTCTTACTGCTGTTATAAAGGGAATGGCCGAAAGGATATCAAATGAATCTGTAAGCTCGGAATATTCTCCAGTGAACCTTGAAGAATATAGTCCATTCTGGATGGTTAAATGTGAGAATTATAGTGATCCAAATCATTGGGTTTCTTTTGTCCGACGAAGAAAGTATATAAAGAGAAGATTGATGATAGGAGCTGACCACTTTAATCGCGATCCTAAGAAAGGTCTAGAGTTTCTCCAAGGAAGACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTTTTCAGATACACTGCTGGATTGGATAAGAATCTAGTTGGTGATTTCCTTGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCATGAATTTGCTAGAACATTTGATTTCCAAGACATGAACTTAGACACAGCCCTGCGCCTCTTTTTGGAGACTTTCAGACTGCCTGGAGAATCACAGAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGGTATTATGAGCAGTCACCTCTTATCCTAGCTAACAAGGATGCTTCTCTTGTGTTATCATACTCAATGATAATGCTTAATACAGATCAGCACAATGTGCAGGTTAAAAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCATATAAATGGTGGCAATGATCTGCCTCGAGAATTCCTGTCAGAGATTTACCATTCGATTTGTAAGAATGAAATCCGCACAACCCCTGAACAAGGTTCAGGATTTCCTGAAATGACACCAAGTCGGTGGATTGATCTAATGCATAAGTCGAAAAAAACTGCTCCATTTATTGTATCTGATTCCAAGGCATACCTCGATCATGATATGTTTGCCATAATGTCAGGCCCAACTATTGCTGCCATCTCCGTGGTATTTGATCATGCTGAACATGAGGAGGTATACCAAACATGTATAGATGGATTTTTAGCCATTGCTAAGATTTCAGCTTGCCACCATCTTGGAGATGTTCTGGATGATTTGGTAGTGTCTCTATGTAAATTCACTACACTTTTGAACCCATCATCAGTTGAAGAACCGCTCCTTGCCTTTGGAGATGACATGAAAGCAAGAATGGCAACTGTTACAGTATTTACAATTGTGAATACGTATGGTGATTACATACGCACAGGTTGGAGAAATATTCTTGATTGCATCTTAAGACTGCACAAGCTAGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGATGATTCAGAGCTTTCTGCTGAAACTGTGCAGGGAAAACCTATTACAAATTCTTTATCCTCAGCTCATATGCAATCTATTGGCACTCCAAGGAGATCCTCAGGATTGATGGGGAGATTTAGTCAACTGTTATCTCTAGACACCGAAGAGCCAAGATCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGCACCTTACAAACAATACAAAAGTGTCACATCGACAGCATATTCACTGAAAGTAAATTTCTGCAAGCTGAATCTCTATTGCAGCTTGCAAAAGCACTCATTTGGGCTGCAGGGCGACCCCAGAAAGGCAACAGCACACCTGAGGATGAAGATACAGCAGTTTTCTGCCTAGAGTTGCTGATTGCAATCACTTTGAATAACAGGGATAGAATTGGGATTCTTTGGCAGGGTGTGTATGAGCACATATCCAATATTGTTCAGACAACTGTAATGCCCTGTGCCCTGGTAGAGAAGGCTGTTTTTGGACTCCTGAGGATTTGCCAGCGGTTGCTTCCATACAAAGAGAGCATTGCTGATGAACTTCTGAGGTCAATGCAACTTGTCTTGAAGCTTGATGCCCGGGTTGCTGATGCGTACTGTGAGCAGATAACTCAGGAAGTCAGTCGCCTTGTGAAGGCGAACGCTTCTCATATAAGATCTCAGTTAGGATGGCGTACAATCACATCACTACTTTCCATAACGGCTAGACACCCAGAAGCATCTGAGGCTGGGTTTGATGCACTATTGTTCATAATGTCTGATGGTGCCCACTTGCTTCCAGCTAATTATGTTTTCTGTATAGATACTGCAAGGCAGTTTGCTGAGTCTCGTGTTGGACAGGCAGAGCGATCTGTACGGGCACTTGATCTCATGGCAGGGTCTGTCAGTTGCTTGGCCCAGTGGGTCGCTGAGGCTAAGGAAGTAATGGAAGAGGAGCAAGTGTCTAAGTTCTCTCAGGATATGGGAGAGATGTGGTTGAGACTAGTGCAGGGTCTAAGAAAGGTGTGTTTGGACCAGAGAGAGGAGGTTAGAAATCATGCTTTATCGTCTTTGCAAAGGTGCTTGACAGGAGCTGGTGACATTTATCTGCCACATGGTTTGTGGCTACAGTGTTTTGATCTTGTGATCTTCACTGTGCTTGATGACCTGCTTGAGATTGCACAGGGACACTCTCAGAAGGACTACCGCAATATGGAAGGCACACTTATCTTTGCGATGAAGCTCTTGTCCAAAGTTTTTCTTCAATTGCTCCCAGATTTATCACAGTTAACAACCTTCTGCAAGCTATGGTTAGGTGTTCTGAGCAGAATGGAAAAATATATGAAGGTAAAGGTTAGGGGGAAAAGAAGTGACAAGCTTCAAGAAAATGTGCCCGAGCTGCTCAAAAACTCCTTACTTGTTATGAAAACAAGGGGTATACTGGCGCAGAGGAGTGCCTTGGGTGGTGATAGTCTGTGGGAATTAACATGGCTACATGTGAATAATATTTCACCGTCATTGCACCTTGAAGTATTCCCAGAGCAGGATTCTGAGCATTCGCTGCACAAACAGGGTGAGTCAGTGGGAGATTCGGTGCCTGATGAAATGGTTTCGATTCCTTCAAGTGAAACGCCAAGCTATGAAGACACTGACACTGTTGGCTGA 4419 0.4277 MGRLKQHGINDAIEEEPEECDVTGTNSNNSTLACMINSEIGAVLAVMRRNVRWGGHYMSGDDQLEHSLIQSLKALRRQIFSWHHQWNAINPALYLQPFLDVIRSDEAGAAITSVALSSVYKILTLDVIDHNTVSVEDAMHLVVDSVTSCRFEVLNASSEEVVLTKILQVLLACMKNKASVMISNQHVCNIVNTCFRIVHQAGTKSELLQQIARYTLHELVRCIFSHLQDVDSTEHALVNGSSSLKLETGGPNNDHIFGGRQSDNGSLGSEYDNQPLPTYSSPNAASVVTATVMDENTAVAISGNESAPYDRHLTEPYGVPCMLEIFSFLCSLLNVVEHTGMGPRSNTIAFDEDMPLFALTLINSAIELGGPSIRRHPRLLSLIQDELFRNLMQFGLSISPLILSMVCSIVLNLYHHLRTELKLQVEAFFSCVILRLAQGRYGASYQQQEVAMESLVDFCRQKTFMVDMYANFDCDITCSNVFEELTSLLSRSAFPVNCPLSAMHILALDGLTAVIKGMAERISNESVSSEYSPVNLEEYSPFWMVKCENYSDPNHWVSFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGRHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFARTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPLILANKDASLVLSYSMIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREFLSEIYHSICKNEIRTTPEQGSGFPEMTPSRWIDLMHKSKKTAPFIVSDSKAYLDHDMFAIMSGPTIAAISVVFDHAEHEEVYQTCIDGFLAIAKISACHHLGDVLDDLVVSLCKFTTLLNPSSVEEPLLAFGDDMKARMATVTVFTIVNTYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADDSELSAETVQGKPITNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLAKALIWAAGRPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQTTVMPCALVEKAVFGLLRICQRLLPYKESIADELLRSMQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSQLGWRTITSLLSITARHPEASEAGFDALLFIMSDGAHLLPANYVFCIDTARQFAESRVGQAERSVRALDLMAGSVSCLAQWVAEAKEVMEEEQVSKFSQDMGEMWLRLVQGLRKVCLDQREEVRNHALSSLQRCLTGAGDIYLPHGLWLQCFDLVIFTVLDDLLEIAQGHSQKDYRNMEGTLIFAMKLLSKVFLQLLPDLSQLTTFCKLWLGVLSRMEKYMKVKVRGKRSDKLQENVPELLKNSLLVMKTRGILAQRSALGGDSLWELTWLHVNNISPSLHLEVFPEQDSEHSLHKQGESVGDSVPDEMVSIPSSETPSYEDTDTVG* 1473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0179 1472 PANTHER ARF GUANINE-NUCLEOTIDE EXCHANGE FACTOR GNOM-LIKE 10 1437 - -
Lan4g0179 1472 Gene3D - 560 642 - -
Lan4g0179 1472 Gene3D - 643 760 IPR023394 -
Lan4g0179 1472 Pfam Sec7 domain 567 750 IPR000904 GO:0005085|GO:0032012
Lan4g0179 1472 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 10 1437 - -
Lan4g0179 1472 SUPERFAMILY Sec7 domain 564 751 IPR035999 GO:0005085|GO:0032012
Lan4g0179 1472 SMART sec7_5 563 750 IPR000904 GO:0005085|GO:0032012
Lan4g0179 1472 MobiDBLite consensus disorder prediction 242 275 - -
Lan4g0179 1472 MobiDBLite consensus disorder prediction 1 24 - -
Lan4g0179 1472 MobiDBLite consensus disorder prediction 1455 1472 - -
Lan4g0179 1472 CDD Sec7 567 750 IPR000904 GO:0005085|GO:0032012
Lan4g0179 1472 MobiDBLite consensus disorder prediction 1432 1472 - -
Lan4g0179 1472 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Lan4g0179 1472 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 320 481 IPR032691 -
Lan4g0179 1472 ProSiteProfiles SEC7 domain profile. 559 748 IPR000904 GO:0005085|GO:0032012
Lan4g0179 1472 MobiDBLite consensus disorder prediction 1432 1447 - -
Lan4g0179 1472 SUPERFAMILY ARM repeat 162 1364 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0179 Lan-Chr4 2929469 2936072 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0179 K18443 - gmx:100780239 2620.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1105 2 22340161 22347396 Lan4g0179 4 2929469 2936072 PCT
Lan9g1302 9 20299047 20305269 Lan4g0179 4 2929469 2936072 PCT