Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1105 ATGGGACATCTAGAGTTGAATACACAAACTGGTACCAACGCAATAGGAGAGGAAAATGGGCATATCGATGTTGGATATCCTAAGACAACCACTGTCGCATGCATTATCAATGCCGAAATTGGTGCTGTTTTGGCAGTCATGCGAAGAAATGTTAGATGGGGAGTTCATTATATGTCAGATGATGATCAGTTGGAGCATTCCCTTGTTCAGTCTTTGAAGTCATTAAGGAGGCAAATTTTTTCGTGGCAGAATCAGTGGCATGGAATCAGCCCTGCTTTGTATCTCCAGCCTTTTCTGGATGTGATTCAATCAGAGGAAACTGGTGCACCCATTACTGGTGTTGCTCTGTCTTCTGTTTACAAGATCTTAACTCTGGATGTAATTGATCAAAACACTGTTAAGGTTGGGGATGCCATGCACTTGGTAGTTGATGCTGTCACAAGTTGCAGATTCGAGGTGACTGATCCTGGATCTGAAGAAGTGGTTTTAATGAAGATATTACAAGTTCTTCTAGCTTGTGTGAAAAGTAAAGCGTCTTTAATGTTGAGTAACCATCATATTTGCACCATAGTGAATACTTGTTTCCGTATCGTTCATCAAGCAGGAACCAAAGGTGAGTTGTTGCAGCGGATAGCCCGATACACAATGCATGAACTTGTTCGGTGTATTTTCTCTCACCTTCAAGATATTAACCGCACAGAGCATCCATTGGTAAATGGGAGCAGTACTTTAAAACAAGAGACTGGTGGGCTAAATAATGAACAAAATTCTGCAAGTATACAATTGGAGAATGGGAGCTTGAATTCTGAAAGTGATGGTGAACCCTTATCTACAGGTATTCTTTCCAGTACTGTTAGTGTCGTGACAGCGGCCGTTGTGGATGAAAACACAGCTATTGCTAGCAATGGCAAGGAGACTGATCTGCTTGAATTGCAGACCACGACCGGCCCATATGGTATTCCCTGCATGGTGGAAATTTTTCACTTCTTGTGTTCTTTGTTGAATGTTGTTGAGCATATGGGAATGAATCCTCGATCAAATACAATAGCATTTGATGAAGACGTGCCTCTTTTTGCCTTAACTTTGATAAATTCAGCCATAGAGTTAGGAGGGCCCTCTTTTCAACTACATCCTAGATTGCTGAGCTTGATTCAGGATGAATTATTCCACAATCTTATGCAATTCGGTTTGTCAATGAGTCCCCTTGTACTTTCAATGGTGTGTAGCATTGTTCTAAATTTGTATCACCATCTTCGTACGGAACTCAAATTACAGCTAGAAGCATTTTTTTCTTGTGTAATTTTGAGGCTTGCACAAAGCAAGTATGGAGCTTCATTTCAGCAACAGGAAGTTGCCATGGAGGCCCTTGTTGACTTTTGCAGGCAAAAGACATTCACGTTGGAGATGTATGCTAACTTCGACTGTGACTTAACATGCAGTAATGTCTTTGAAGACATTGCTAATTTATTGTCCAAAAGTGCATTTCCTGTGAACAGTCCACTGTCTTCCATGCATGTTCTTGCTTTGGATGGTCTTATTGCTGTCATACAGGGAATAGCTGAAAGGATAGGCAATGGATCTTTAAGTAGTTCAGAAAATTTTTCTGTGAATCTTGAAGAGTATACTTCATTCTGGCTGGAAAAGTGTGAAAATTTCAGTGATCCAAATAATTGGGTTCCTTTTGTTTGCCGAAGAAAGTACTTCAAGAAAAGATTGATGATTGGATCTGATCATTTTAATCGTGATATTAAGAAAGGTCTTGAGTTTCTCCAACGAACACATCTCTTACCTGAAAAACTTGATCCCCAAAGTGTTGCATGGTTTTTCAGATACACTGCTGGGCTAGATAAGAATCTCATTGGTGATTACCTGGGAAACCATGATGAGTTCTGCGTTCAGGTTCTTCATGAATTTGCTAGAACATTTGATTTCAAAGACATGACATTAGACAATGCACTGCGATTATTTTTGGAGACTTTCAGACTGCCTGGAGAATCACAGAAGATACAGAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAGTTGCCTGATATCCTTGCTAACAAGGATGCTGCTCTCTTGTTATCATACTCTATCATAATGCTTAATACAGATCGTCACAATGCACAGGTCAAAAAGAAGATGACAGAAGAGGATTTTATCCGAAATAATAGGCGAATAAATGGTGGCAATGATCTACCTCGAGAATACCTGTCAGATCTTTACCATTCAATCTGTAAGAATGAGATCCGCACAACTCGTGAGCAAGGTTCTGGATTTCCTGAAATGACTTCAAGTAGGTGGATTTATCTCTTGCACAACTCAAAAATCTCTGCTCCATTCATTGTTTCTGATTCCAGAGCATACCTCGATTATGATATGTTTTCTATGTTGTCTGGTCCTACAATTGCTGCAATTTCCGTGGTGTTTGATAATGCTGAAAATGAGGAGGTATACCAAACATGTATGGATGGATTCTTAGCTGTTGCGAAGATATCAGCTCACTATAATCTTGAAAATGTACTGGATGATTTGGTTGTGTCTCTTTGTAAGTTCATTACTACTTTGGATCCATTATCTGTGGAGGAGTCAATCCTAGCCTTTGCAGATGACACAAAAGCAAGAATGGCAACTGAGACGGTTTTCACTATTGCGAATATGCATGGTGATTACATCCGCACTGGGTGGAGGAATATTCTTGACTGTATCATAAGATTGCACAAATTAGGCCTTCTTCCTGCTCGTATGGCCACTGATGCGGCTGAGCAGTCAGAGCTTTCTACAGAAACTGGTCATGGGAAACAAAATACTTCTGTATCTTCAACATATCTTCCATCTGTTAGTACTCCGAAGAGATCCTTGGGATTAATGAGCAGGTTTAGTCAACTCTTATATCTTGGAGCTGAAGAGCCAAGATCAGTACCGACTGAAGAAGAACTTGCTGCTCAGCAGTGTGCTCTTCAAACAATACAGAAGTGTCACATTGACAGCATATTCACCAAGAGTAAATTTTTGCAGCCTGAATCTCTATTGCAGCTTTCAAGAGCACTCATTGGTGCAGGAGATCGACCTAAGAAAGGGTACAGAACATCTGAGGATGAAGATACTTCAGTTTTCTGCCTGGAGTTACTTGTGGCAACCGCTCTGAATAACAGGGATAGGATTGAACTTCTTTGGCAGGGTCTTTATGAGCACATATCCAATATTGTTCAGTCAACTGTGATACCATGTGCACTGGTAGAGAAGGCTGTTTTCGGACTCTTGAGGATTTGCCACCGCTTACTTCCCTACAAAGAGAACATTACTGAAGAACTTTTGAGGTCTCTTCAACTTGTCCTAAAGCTTGATGCACGTGTTGCTGATGAATATTATGAACAGATTACACAAGAAGTCAATCACCTTCTGAAGGCAAATGCTTCTCATATTAGATCTCAGTTAGGATGGCGGACGATTACGTCACTGCTTTCCATCACTGCTAGACACCTGGAAGCATCTGAGGCCGGATTTGATGCGCTATTGTTCATTATGTCAGATGGAGCCCACTTGCTTCCAGCTAATTATGTTCTCTGTGTGGATGCTGCAAAGCAGTTTGCTGAGTCTCGTGTTGGAGAGGTAGAGCGGTCTGTAATGGCACTTGATCTTATGGCAGGGTCTGTCACTTGTTTAAAAAAGTGGACCAGTGATGCTAAGCAAGCATTGAAAGAAGAGGAAGTGGCAAAGATGTTGCAGGATATTGGAGACATGTGGTTGAGACTTGTACATGGACTAAGTAAACTATGCTTGGACCAGAGAGAGGAGGTTAGAAACCATGCGTTGTTATCACTGCACAATTTCTTGACAGGATCGGTTGGGATACATCTCCCACATGATTTGTGGTTACAATGTTTTGATCAAGTGATCTTCACTGTGGTTGATGAGCTGCTTGAAATTTCGCAGACACGGTCTCAAAAGGACTACAGGAACATGGAAGGAACACTTGTTCTTGCCTTGAAGCTCTTATGTAAAGTTTTCCTCCAGTTACTCCAAGACTTATCACAGTTGACAGACTTCAGCAAATTATGGTTGGGTGTACTAAGTCGGTTGGAAATATATATGAAGATAAAAATTAGGGGAAGGAGAAGCGAGAAGATTCAAGAGCTTGTGCCTGAACTTCTTAAGAACACTTTGCTTGTTATGAAAGCAGGAGTCATACTAGTGCGGAGCAGTAGTGTAGATGGAAATAGTTTGTGGGAACTGACATGGCAGCATATAGATAACATTGCCCCATCATTGCAGTCTGAAGTGTTTCCTGAGCAAGATTCAGAGGATTTGCAGCACAAACAATCTGAAATAGTTAGCAGTTTGGGACCTCATGAAAACATTTCTGTTCCTTCAAATGGAACTGCAGTCCAAGATGGTGGCGCTGGTGTTGGTTAA 4422 0.4104 MGHLELNTQTGTNAIGEENGHIDVGYPKTTTVACIINAEIGAVLAVMRRNVRWGVHYMSDDDQLEHSLVQSLKSLRRQIFSWQNQWHGISPALYLQPFLDVIQSEETGAPITGVALSSVYKILTLDVIDQNTVKVGDAMHLVVDAVTSCRFEVTDPGSEEVVLMKILQVLLACVKSKASLMLSNHHICTIVNTCFRIVHQAGTKGELLQRIARYTMHELVRCIFSHLQDINRTEHPLVNGSSTLKQETGGLNNEQNSASIQLENGSLNSESDGEPLSTGILSSTVSVVTAAVVDENTAIASNGKETDLLELQTTTGPYGIPCMVEIFHFLCSLLNVVEHMGMNPRSNTIAFDEDVPLFALTLINSAIELGGPSFQLHPRLLSLIQDELFHNLMQFGLSMSPLVLSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSKYGASFQQQEVAMEALVDFCRQKTFTLEMYANFDCDLTCSNVFEDIANLLSKSAFPVNSPLSSMHVLALDGLIAVIQGIAERIGNGSLSSSENFSVNLEEYTSFWLEKCENFSDPNNWVPFVCRRKYFKKRLMIGSDHFNRDIKKGLEFLQRTHLLPEKLDPQSVAWFFRYTAGLDKNLIGDYLGNHDEFCVQVLHEFARTFDFKDMTLDNALRLFLETFRLPGESQKIQRVLEAFSERYYEQLPDILANKDAALLLSYSIIMLNTDRHNAQVKKKMTEEDFIRNNRRINGGNDLPREYLSDLYHSICKNEIRTTREQGSGFPEMTSSRWIYLLHNSKISAPFIVSDSRAYLDYDMFSMLSGPTIAAISVVFDNAENEEVYQTCMDGFLAVAKISAHYNLENVLDDLVVSLCKFITTLDPLSVEESILAFADDTKARMATETVFTIANMHGDYIRTGWRNILDCIIRLHKLGLLPARMATDAAEQSELSTETGHGKQNTSVSSTYLPSVSTPKRSLGLMSRFSQLLYLGAEEPRSVPTEEELAAQQCALQTIQKCHIDSIFTKSKFLQPESLLQLSRALIGAGDRPKKGYRTSEDEDTSVFCLELLVATALNNRDRIELLWQGLYEHISNIVQSTVIPCALVEKAVFGLLRICHRLLPYKENITEELLRSLQLVLKLDARVADEYYEQITQEVNHLLKANASHIRSQLGWRTITSLLSITARHLEASEAGFDALLFIMSDGAHLLPANYVLCVDAAKQFAESRVGEVERSVMALDLMAGSVTCLKKWTSDAKQALKEEEVAKMLQDIGDMWLRLVHGLSKLCLDQREEVRNHALLSLHNFLTGSVGIHLPHDLWLQCFDQVIFTVVDELLEISQTRSQKDYRNMEGTLVLALKLLCKVFLQLLQDLSQLTDFSKLWLGVLSRLEIYMKIKIRGRRSEKIQELVPELLKNTLLVMKAGVILVRSSSVDGNSLWELTWQHIDNIAPSLQSEVFPEQDSEDLQHKQSEIVSSLGPHENISVPSNGTAVQDGGAGVG* 1474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1105 1473 Pfam Guanine nucleotide exchange factor in Golgi transport N-terminal 321 482 IPR032691 -
Lan2g1105 1473 Gene3D - 562 644 - -
Lan2g1105 1473 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11 1460 - -
Lan2g1105 1473 SUPERFAMILY Sec7 domain 566 759 IPR035999 GO:0005085|GO:0032012
Lan2g1105 1473 CDD Sec7 569 752 IPR000904 GO:0005085|GO:0032012
Lan2g1105 1473 PANTHER PATTERN FORMATION PROTEIN GNOM PROTEIN 11 1460 - -
Lan2g1105 1473 SMART sec7_5 565 752 IPR000904 GO:0005085|GO:0032012
Lan2g1105 1473 Pfam Sec7 domain 569 752 IPR000904 GO:0005085|GO:0032012
Lan2g1105 1473 ProSiteProfiles SEC7 domain profile. 561 750 IPR000904 GO:0005085|GO:0032012
Lan2g1105 1473 MobiDBLite consensus disorder prediction 924 946 - -
Lan2g1105 1473 MobiDBLite consensus disorder prediction 1451 1473 - -
Lan2g1105 1473 SUPERFAMILY ARM repeat 352 1346 IPR016024 -
Lan2g1105 1473 Gene3D - 645 762 IPR023394 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1105 Lan-Chr2 22340161 22347396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1105 K18443 - gmx:100784083 2473.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1105 2 22340161 22347396 Lan9g1302 9 20299047 20305269 LSH
Lan2g1105 2 22340161 22347396 Lan4g0179 4 2929469 2936072 PCT