Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1020 ATGAGTGAGAATAATGAACAAGCTCCACGTCTAGCTCCACGTTTGAATGAAAGGATTCTTTCATCTATGTCAAGAAGATCAGTTGCTGCTCACCCTTGGCATGATCTTGAAATTGGTCCTGGAGCACCCCACATTTTCAATGTTGTTGTGGAGATCTCAAAGGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGACTAATTAAGGTTGATCGAATTTTATACTCGTCGGTTGTTTATCCTCATAACTACGGCTTTATCCCTCGAACTCTTTGCGAAGACAATGATCCAATTGATGTCTTGGTTCTCATGCAGGAGCCAATTCTTCCTGGTACTTTTCTTCGAGCCAAGGCCATTGGACTGATGCCAATGATTGACCAAGGTGAGAAGGATGATAAAATTATTGCAGTATGTGCTGATGATCCTGAGTATAGGCACTATACTGACTTAAAAGAACTTCCGCCTCATCGCCTTATGGAGATTCGACGCTTCTTCGAAGACTACAAGAGAAATGAGAATAAGGAGGTAGCAGTTAATGAGTTTTTGCCTCCAGCTACTGCTGTTGAAGCCATCCAATACTCAATGGATCTTTATGCTGAGTATATTCTACACACCTTGAGGAGATAG 630 0.4159 MSENNEQAPRLAPRLNERILSSMSRRSVAAHPWHDLEIGPGAPHIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPIDVLVLMQEPILPGTFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRHYTDLKELPPHRLMEIRRFFEDYKRNENKEVAVNEFLPPATAVEAIQYSMDLYAEYILHTLRR* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1020 209 PANTHER INORGANIC PYROPHOSPHATASE 15 208 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan9g1020 209 Hamap Inorganic pyrophosphatase [ppa]. 44 200 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan9g1020 209 ProSitePatterns Inorganic pyrophosphatase signature. 95 101 - -
Lan9g1020 209 PANTHER BNAC07G03580D PROTEIN 15 208 - -
Lan9g1020 209 SUPERFAMILY Inorganic pyrophosphatase 25 205 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan9g1020 209 CDD pyrophosphatase 45 197 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan9g1020 209 Gene3D Inorganic pyrophosphatase 27 205 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan9g1020 209 Pfam Inorganic pyrophosphatase 48 199 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1020 Lan-Chr9 17240168 17243408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1020 K01507 - egr:104442403 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0604 11 4842032 4845198 Lan9g1020 9 17240168 17243408 LSH
Lan4g0817 4 10175494 10178880 Lan9g1020 9 17240168 17243408 PCT
Lan9g1020 9 17240168 17243408 Lan4g0817 4 10175494 10178880 PCT