Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan4g0817 ATGAGTGATGAGAAAAATGGTGAAGAAGGTCAAGAAACACGTCAAGCTCCACGTTTGAATGAAAGGATTCTTTCATCTTTGTCTAAGAGATCAGTAGCTGCACACCCTTGGCATGATCTTGACATTGGACCCGGAGCTCCACATATTTTCAATGTTGTTGTGGAGATCAGTAAGGGAAGCAAGGTCAAATATGAACTTGACAAAAAGACTGGACTAATTAAGGTTGATCGGATTTTGTACTCATCTGTTGTTTATCCTCATAACTATGGTTTCATCCCTCGTACATTGTGTGAAGACAATGATCCTCTTGATGTCTTGGTTCTCATGCAGGAGCCAATTCTTCCTGGTTGTTTCTTGAGAGCCAGGGCCATTGGACTAATGCCTATGATTGACCAGGGAGAAAAGGATGATAAGATTATTGCAGTATGTGCTGATGATCCTGAGTATAAGTACTATTCTGACTTCAAAGAACTTGCACCTCATCGAATGACCGAGATTCGGCGCTTCTTTGAAGATTATAAAAAGAATGAAAACAAGGAGGTAGCAGTTAATGATTTTTTGCCTGCAAGCAGTGCTGAAGAAGCCATCCAGTACTCAATGGATCTTTATGCAGAGTATATTATGCATACCTTGAGGAGATAG 642 0.405 MSDEKNGEEGQETRQAPRLNERILSSLSKRSVAAHPWHDLDIGPGAPHIFNVVVEISKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPLDVLVLMQEPILPGCFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKYYSDFKELAPHRMTEIRRFFEDYKKNENKEVAVNDFLPASSAEEAIQYSMDLYAEYIMHTLRR* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan4g0817 213 ProSitePatterns Inorganic pyrophosphatase signature. 99 105 - -
Lan4g0817 213 SUPERFAMILY Inorganic pyrophosphatase 27 210 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan4g0817 213 Gene3D Inorganic pyrophosphatase 31 209 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan4g0817 213 CDD pyrophosphatase 49 201 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan4g0817 213 Hamap Inorganic pyrophosphatase [ppa]. 48 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan4g0817 213 PANTHER INORGANIC PYROPHOSPHATASE 19 213 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan4g0817 213 PANTHER BNAC07G03580D PROTEIN 19 213 - -
Lan4g0817 213 Pfam Inorganic pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan4g0817 Lan-Chr4 10175494 10178880 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan4g0817 K01507 - pop:7486812 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0817 4 10175494 10178880 Lan11g0604 11 4842032 4845198 PCT
Lan4g0817 4 10175494 10178880 Lan9g1020 9 17240168 17243408 PCT
Lan11g0604 11 4842032 4845198 Lan4g0817 4 10175494 10178880 PCT
Lan9g1020 9 17240168 17243408 Lan4g0817 4 10175494 10178880 PCT