Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0604 ATGTCTTTAAAGATGAGTGATAATGGTGAAGAAGCTCCCCGTTCCGCTCCACGTTTGAATGAAAGGATTCTTTCATCTATGTCAAGAAGATCAGTTGCTGCTCACCCTTGGCATGATCTTGAAATTGGACCCGGAGCACCCCACATTTTCAATGTTGTTGTGGAGATCACTAAGGGAAGCAAGGTCAAATATGAACTTGACAAGAAGACTGGACTAATCAAGGTTGATCGGATTTTGTATTCATCGGTTGTTTATCCTCATAACTATGGTTTTATTCCTCGAACTCTGTGTGAAGACAATGATCCAATTGATGTCTTGGTCCTAATGCAGGAGCCAATTCTTCCTGGTACTTTCCTGCGAGCCAGGGCCATCGGACTCATGCCTATGATTGACCAGGGCGAAAAGGATGATAAAATTATTGCAGTGTGTGCTGATGATCCTGAGTATAAGCACTACACTGACTTCAAAGAACTTGCACCTCATCGCCTCATGGAGATTCGGCGCTTCTTTGAAGACTACAAGAGGAATGAGAACAAGGAGGTAGCAGTTAACGATTTTTTGCCACCAGCCACTGCTGTTGAAGCCATCCAACACTCAATGGATCTTTATGCTGAGTACATTCTGCACACCTTAAGGCGATAG 642 0.4377 MSLKMSDNGEEAPRSAPRLNERILSSMSRRSVAAHPWHDLEIGPGAPHIFNVVVEITKGSKVKYELDKKTGLIKVDRILYSSVVYPHNYGFIPRTLCEDNDPIDVLVLMQEPILPGTFLRARAIGLMPMIDQGEKDDKIIAVCADDPEYKHYTDFKELAPHRLMEIRRFFEDYKRNENKEVAVNDFLPPATAVEAIQHSMDLYAEYILHTLRR* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0604 213 Hamap Inorganic pyrophosphatase [ppa]. 48 204 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g0604 213 PANTHER INORGANIC PYROPHOSPHATASE 19 212 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g0604 213 SUPERFAMILY Inorganic pyrophosphatase 29 209 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g0604 213 MobiDBLite consensus disorder prediction 1 20 - -
Lan11g0604 213 PANTHER BNAC07G03580D PROTEIN 19 212 - -
Lan11g0604 213 Pfam Inorganic pyrophosphatase 52 203 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g0604 213 ProSitePatterns Inorganic pyrophosphatase signature. 99 105 - -
Lan11g0604 213 Gene3D Inorganic pyrophosphatase 31 209 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Lan11g0604 213 CDD pyrophosphatase 49 201 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0604 Lan-Chr11 4842032 4845198 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0604 K01507 - twl:119982106 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0604 11 4842032 4845198 Lan9g1020 9 17240168 17243408 LSH
Lan4g0817 4 10175494 10178880 Lan11g0604 11 4842032 4845198 PCT
Lan11g0604 11 4842032 4845198 Lan4g0817 4 10175494 10178880 PCT