Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0668 ATGGTTAGGGCACTTGAACAAGAGCAAGAAAGTTATAAGTCCAAACTATTCCATTTTAAAGGGATGTTTGAGAACACAGGAAGACATACAAAGAGTTTGAGCATTGAAAGTGCTACCAAATTAGATCCTTCAGAAGAAGATGCAGTATCATCATCGTCGTCATTATCGTCATCATCGTCATCATCATCCAAAAGTCAAGGATCAAAACCTATAAACAATTCTGATAAAGGATCAAGGCCAAAGATAATAAGCAAAGAGGAAATTGCAGCTAGAGAAGCCAATGAAAAGCTAATGCAAGAAATGGAACAGATGAAGGAAAGATTTGCAAAACTTTTATTAGGTGAGGATATGTCTGGTGGAGGAAAAGGTGTTTCATCAGCTTTAGCATTATCAAATGCATTCACAAACCTAGCAGCTGCTGTTTTTGGTGAACAAAAGCGCCTAGAGCCAATGTCACCAGAAAGGAAATCAAGATGGAGAAAAGAAATTGATTGGCTTTTATCAGTCACAGATTACATTGTTGAAATGGTTCCTTCACAACAAAAAGCAAAGGATGGATCAACCATGGAGATTATGACAACGCGTCAACGAACTGATCTTCACATGAATATCCCTGCGTTGCGAAAGCTTGATACAATGCTTAATGATTGTCTAGATAATTTCAAAGGGCAAAATGAATTCTATTATGTAAAGAAAGAGGAAGGAGATGCAGATAAAGACGGTAAAACCGATGAAAAGTGGTGGTTGCCAACACCTAAGGTTCCTGTTGATGGTTTATCTGATGTTGCAAGAAAGTTTCTGCAATATCAAAAAGATTGTGTGACTCAAGTACTTAAAGCAGCCATGGCCATAAATGCTCAAACTCTATCAGAAATGGAAATCCCTGAAAGCTATATCGAATCCCTACCCAAGAATGGAAGAGCAAGTCTAGGTGACACAATCTATCGTAGTATCACAGATGATTATTTTGATCCAGACCAGTTACTAGGTACTATGGACTTATCATCAGAACATAAGATCCTAGATCTCAAGAATAAAATTGAGGCATCGATCGTGATTTGGAAACGAAAGATGAACCAAAAGGATTCAAAATCAGCTTGGGGTTCTGCTATAAGTATGGAAAAAAGAGAACTATTTGAAGAGAGAGCAGAAACTATCCTTCTTTTTTTAAAGCATCGTTTCCCTGGGATACCTCAATCTGCATTGGATATAAGCAAAATCCAATTCAATAAGGATGTAGGGCAAGCTGTTCTTGAAAGCTATTCAAGAATATTGGAAAGTTTAGCCTATACAGTACTATCAAGAATAGAAGATGTACTAAATGCTGATTCTCAAAATCAAAATTCATCACAACTAGGAAAAAAGAACAATATGAAAAACACAATTCCAAAACCTGAGAAGCCTCTAACTCCTAAAGAAGGGGTACAAATAGAAAAGGGTGGTGCAGAAGAAATACCTAGTTCAATGACACTATCAGATTTCATGGGCTGGCTCGGTGACTCGGACATGAAAAAAGACCCTTCTACAATTCCAGATGAATTGGACAATGACATTGATAATGGAAAACCTATTAAACTCTCAAACGTAGTGACAGATAACAAAAAAGCCTCATACCTTGAGAATTTGGGAGGTGTTAAAAGTCCAATATGTCGCCAATAA 1659 0.3713 MVRALEQEQESYKSKLFHFKGMFENTGRHTKSLSIESATKLDPSEEDAVSSSSSLSSSSSSSSKSQGSKPINNSDKGSRPKIISKEEIAAREANEKLMQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMSPERKSRWRKEIDWLLSVTDYIVEMVPSQQKAKDGSTMEIMTTRQRTDLHMNIPALRKLDTMLNDCLDNFKGQNEFYYVKKEEGDADKDGKTDEKWWLPTPKVPVDGLSDVARKFLQYQKDCVTQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDTIYRSITDDYFDPDQLLGTMDLSSEHKILDLKNKIEASIVIWKRKMNQKDSKSAWGSAISMEKRELFEERAETILLFLKHRFPGIPQSALDISKIQFNKDVGQAVLESYSRILESLAYTVLSRIEDVLNADSQNQNSSQLGKKNNMKNTIPKPEKPLTPKEGVQIEKGGAEEIPSSMTLSDFMGWLGDSDMKKDPSTIPDELDNDIDNGKPIKLSNVVTDNKKASYLENLGGVKSPICRQ* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0668 552 Coils Coil 83 114 - -
Lan9g0668 552 MobiDBLite consensus disorder prediction 30 78 - -
Lan9g0668 552 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 99 551 - -
Lan9g0668 552 Gene3D PRONE domain, subdomain 2 293 409 - -
Lan9g0668 552 Gene3D PRONE domain, subdomain 1 105 444 - -
Lan9g0668 552 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 99 551 IPR038937 GO:0005085
Lan9g0668 552 MobiDBLite consensus disorder prediction 444 473 - -
Lan9g0668 552 MobiDBLite consensus disorder prediction 30 85 - -
Lan9g0668 552 ProSiteProfiles PRONE domain profile. 91 453 IPR005512 GO:0005085
Lan9g0668 552 MobiDBLite consensus disorder prediction 444 458 - -
Lan9g0668 552 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 99 447 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0668 Lan-Chr9 9843682 9846606 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0668 - - gmx:100777496 791.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0589 5 11808569 11812106 Lan9g0668 9 9843682 9846606 LSH
Lan9g0668 9 9843682 9846606 Lan2g0441 2 4792746 4796295 LSH