Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0441 ATGGTGAGGGCAGTAGAACAAGAACAAGAAAGTTATAGGTCTAAACTATCCCATTTTAAAGGGATGTTTGAGAACACAGGAAGACATACAAAAAGTTTGAGCATTGAGAGTGTTACCAAATTAAATCCTTCAGAAGAAGATGTGACATCGTCATCATCATCGTCCTCATCATCATCTAGAAGTCAAGGATCAAAACCTCTACATAATTATGATAAAGGTTCAAGGCAAAGGATAATAACCAAGGAGGAAATTGCAGCTAAAGAAACACATGAGAAGCTATTACAAGAAATGGAACAAATGAAGGAGAGATTTGCAAAACTGCTTTTGGGGGAGGATATGTCTGGTGGAGGAAAAGGTGTTTCATCATCTTTGGCATTATCAAATGCATTCACAAACCTTGCAGCTGCTGTTTTTGGTGAACAAAAGCGCCTAGAGCCAATGCCACCAGAAAGGAAAGCAAGATGGAGAAAAGAAATAGATTGGCTTCTATCAGTTAACGACTACATTGTTGAAATGGTTCCGTCACAACAATTATCAAAGGATGGCACAATCATGGAGATTATGACAACAAGACAACGAAGTGATCTCCACATGAATATTCCTGCATTGAGAAAGCTTGATACAATGCTTGGTGATTGTCTAGATAATTTCAAAGACCAGAAAGATTTCTTTTATGTAAAAAGAGAGGAAGGTGATGTAGATAAAGACAACAAAAACAATGACAAGTGGTGGTTACCAATGCCTAAGGTTTCACCAAATGGTTTGTCTGATGAGGCAAGAAAGTTTCTGCAGTACCAGAAAGATTGTGTGACTCAGGTGCTTAAAGCAGCCATGGCTCTAAATGCTCAAACTCTAGTAGAAATGGAGATCCCTGAAAGCTATATTGAATCCCTTCCCAAGAATGGAAGAGCAAGTCTAGGGGAATCAATCTACCGTAGTATTACAGATGATTTTTTTGATCCTGATCAGTTACTATGCACCATGGACTTATCATCAGAACATAAAATCCTGGAACTCAAGAATAAAATCGAGGCATCAATTGTGATTTGGAAGCGGAAGAAGAACCAAAAAGATTCAAAATCAGCTTGGGGTTATGCTGTGAGTGTGGAGAAAAGAGAACTATTTGAAGAGAGAGCAGAAACTATCCTACTTTTCATAAAACATCGTTTCCCTGGAATCCCTCAATCTACTTTGGATATAAGCAAAATCCAATTTAATAAGGATGTAGGGCAAGCTGTTCTTGAAAGTTATTCAAGAATATTGGAAAGTTTAGCCTATACAGTATTGTCAAGAATAGAAGAAGTACTAAATGCTGATTACCAAACTCAAAATCCAACAAAAGTAGGAAAAATGAACACAATGAGAAACACAATTCCAAGATCAGAGAAACTTCTATCCATTAAACAAGAGGTACAAGAAGAAGAACTACATGCTTCAATGACACAATCAAATAACATAGACATTAAAAAGGACCCTTCTACAAGTCCAAATGAATTGGACAATGAAATTGATAGTGAAAAGCCTACAAAATTGACAAACATAGTGACTGACAAGAAGACATCCTACCTAGAGAACTTGGGAGGTGTAAGAAGTCCAACATGTTACCAATAA 1611 0.37 MVRAVEQEQESYRSKLSHFKGMFENTGRHTKSLSIESVTKLNPSEEDVTSSSSSSSSSSRSQGSKPLHNYDKGSRQRIITKEEIAAKETHEKLLQEMEQMKERFAKLLLGEDMSGGGKGVSSSLALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVNDYIVEMVPSQQLSKDGTIMEIMTTRQRSDLHMNIPALRKLDTMLGDCLDNFKDQKDFFYVKREEGDVDKDNKNNDKWWLPMPKVSPNGLSDEARKFLQYQKDCVTQVLKAAMALNAQTLVEMEIPESYIESLPKNGRASLGESIYRSITDDFFDPDQLLCTMDLSSEHKILELKNKIEASIVIWKRKKNQKDSKSAWGYAVSVEKRELFEERAETILLFIKHRFPGIPQSTLDISKIQFNKDVGQAVLESYSRILESLAYTVLSRIEEVLNADYQTQNPTKVGKMNTMRNTIPRSEKLLSIKQEVQEEELHASMTQSNNIDIKKDPSTSPNELDNEIDSEKPTKLTNIVTDKKTSYLENLGGVRSPTCYQ* 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0441 536 MobiDBLite consensus disorder prediction 22 76 - -
Lan2g0441 536 Coils Coil 83 107 - -
Lan2g0441 536 MobiDBLite consensus disorder prediction 476 492 - -
Lan2g0441 536 MobiDBLite consensus disorder prediction 476 508 - -
Lan2g0441 536 MobiDBLite consensus disorder prediction 27 69 - -
Lan2g0441 536 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 95 443 IPR005512 GO:0005085
Lan2g0441 536 Gene3D PRONE domain, subdomain 1 101 439 - -
Lan2g0441 536 Gene3D PRONE domain, subdomain 2 289 405 - -
Lan2g0441 536 MobiDBLite consensus disorder prediction 493 508 - -
Lan2g0441 536 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 95 534 - -
Lan2g0441 536 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 95 534 IPR038937 GO:0005085
Lan2g0441 536 ProSiteProfiles PRONE domain profile. 87 449 IPR005512 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0441 Lan-Chr2 4792746 4796295 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0441 - - gmx:100812078 722.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0589 5 11808569 11812106 Lan2g0441 2 4792746 4796295 LSH
Lan9g0668 9 9843682 9846606 Lan2g0441 2 4792746 4796295 LSH