Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0589 ATGGTTAGGGCACTAGAACAAGATCAGGATAGTTATAGGTCCAAACTATTCAATTTCAAAGGGATGTTTGATAACACAGGAGGAAGACATGCAAAGAGTTTGAGCATTGAAAGTGCTGCAAAATTAGAAAATCCTTCAGAAGAAGATGCAGTGTCATCATCCTCTAGAAATCAAGGATCAAAACCTTTACCGAATTCTGATAAGGGTTCAAAGCCAAGAATAATAAGCAAGGAGGAAATTGCAGCCAAAGAAGCCAATGATAAATTATTACAAGAATTGGAACAGATGAAGGAGAGATTTGCAAAACTTCTATTAGGTGAAGATATGTCTGGTGGAGGAAAAGGTGTTTCATCAGCTTTGGCTTTGTCAAATGCATTCACAAACCTTGCTGCTGCTATTTTTGGCGAACAAAGGCGCTTAGAGCCAATGCCACCAGAAAGAAAAGCAAGATGGAGAAAAGAAATTGATTGGCTTCTATCAGTCACAGATTACATTGTTGAAATGGTTCCATCACAACAAAAATCAAAGGATGGTTCAAGCATGGAGATTATGACAACAAGACAAAGAAGAGATCTCCATATGAATATTCCTGCCTTGAGAAAGCTTGATACAATGCTTAATGATTGTTTAGATAACTTCAAAGGCCAAAGTGAATTCTATTATGTAAAAAAAGAAGAAGGTGATGCAGATACAAACAATAAAAATGATGATAAGTGGTGGTTACCAACACCTAAGGTTCCTGAAGAAGGTTTATCAGATGTGGCAAGAAAGTTTCTACAATATCAAAAAGATTGTGTGACTCAAGTTCTTAAAGCAGCCATGGCTATAAATGCTCAAACTCTATCAGAAATGGAAATTCCTGAAAGCTATATTGAATCCTTACCTAAGAATGGAAGAGCAAGTTTAGGGGACTTAATCTATCGGAGTATTACAGATGAATTTTTTGATCCTGACCAATTATTATGCACCATGGACTTATCATCAGAGCACAAAATTCTAGATCTGAAGAATAAAATCGAAGCATCGATCGTGATTTGGAGGCGAAAGATGAACCAAAAAGATTCAAAATCAGCTTGGGGTTCTGCTGTGAGTATGGAAAAAAGAGAATTGTTTGAAGAAAGAGCAGAAACTATTCTTCACCTCTTAAAGCATCGTTTCCCTGGAATCCCTCAATCTGCATTAGATATAAGCAAAATCCAGTTCAATATGGATGTGGGACAAGCTGTTCTTGAAAGCTATTCAAGAATATTGGAAAGTTTGGCCTATACAGTATTGTCAAGAATAGAAGATGTTCTAAATGCTGATTACCAAACTCAAAATCCATCACAACTAGGTAAAAGAGGTGCTATGAAAAACTCAACTTCAAAATCAGATAGGCCTCTAACTCTTAGAGAAGATGTAGTATCAGACATGGGTGGTTTAGAAGAAATACCAGCAGGTTCAATGACACTATCAGATTTTATGGGTTGGCTTGGTGAACATGGTGATTCAGACATGAAGAAGGACACTCATGCAATTCCAAATGAATTGGAAAATGAGTTTGGTGTTGGAAAGACTGAAAAGTTGGCAAATATACCAACTGAGAAGGTTTCATATGTTGAGAATTTGGGAGGTGTTAGAAATTCAACATGGAGCCAATAA 1641 0.3668 MVRALEQDQDSYRSKLFNFKGMFDNTGGRHAKSLSIESAAKLENPSEEDAVSSSSRNQGSKPLPNSDKGSKPRIISKEEIAAKEANDKLLQELEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAIFGEQRRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPSQQKSKDGSSMEIMTTRQRRDLHMNIPALRKLDTMLNDCLDNFKGQSEFYYVKKEEGDADTNNKNDDKWWLPTPKVPEEGLSDVARKFLQYQKDCVTQVLKAAMAINAQTLSEMEIPESYIESLPKNGRASLGDLIYRSITDEFFDPDQLLCTMDLSSEHKILDLKNKIEASIVIWRRKMNQKDSKSAWGSAVSMEKRELFEERAETILHLLKHRFPGIPQSALDISKIQFNMDVGQAVLESYSRILESLAYTVLSRIEDVLNADYQTQNPSQLGKRGAMKNSTSKSDRPLTLREDVVSDMGGLEEIPAGSMTLSDFMGWLGEHGDSDMKKDTHAIPNELENEFGVGKTEKLANIPTEKVSYVENLGGVRNSTWSQ* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0589 546 ProSiteProfiles PRONE domain profile. 83 445 IPR005512 GO:0005085
Lan5g0589 546 Gene3D PRONE domain, subdomain 2 285 401 - -
Lan5g0589 546 MobiDBLite consensus disorder prediction 439 457 - -
Lan5g0589 546 MobiDBLite consensus disorder prediction 47 65 - -
Lan5g0589 546 MobiDBLite consensus disorder prediction 439 459 - -
Lan5g0589 546 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 91 543 IPR038937 GO:0005085
Lan5g0589 546 MobiDBLite consensus disorder prediction 41 73 - -
Lan5g0589 546 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 92 439 IPR005512 GO:0005085
Lan5g0589 546 Coils Coil 79 106 - -
Lan5g0589 546 Gene3D PRONE domain, subdomain 1 97 435 - -
Lan5g0589 546 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 91 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0589 Lan-Chr5 11808569 11812106 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0589 - - gmx:100812078 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan5g0589 5 11808569 11812106 Lan9g0668 9 9843682 9846606 LSH
Lan5g0589 5 11808569 11812106 Lan2g0441 2 4792746 4796295 LSH