Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0417 ATGGGAGAGAAAGAAGGGGGGAATAAAAAAAATGTTGTTTTGAAGCTAGACTTACACTGCGAGGGTTGTGTAATGAGAATTGAAAAAGCCGTTCGTCACTTCGAAGGTGTGGAAGACGTAAAGGCTAATATGTCTTCTAATGAACTAACCGTTATCGGAAAAGTGGACTCGGCTATGTTACGAGATAAACTGGCCAAGAAAACCAGAAAGAAAATCGAAATCGTTTCACAACCGCCGAAGGAAGATGCCGCCGCCGAAGAATCGCCGGAGAAGAAGTCTGAAGAGGAGAATAAACCAAAAAAGATCACGGTGGTTTTGAAGACTGGCATGAACTGTGTCTGTGATGGTTGCATTCAAAAAGTTCATAAGCTTATCCTCAAGGTCAAAGGAGTTGAATCTGCGAGCTTTGGTGGAAACAAAGAATCAGTAACAGTTGAAGGAACAATGAATGCTGAAGAATTAGTATCATACATGAACAAGAAAATGAAGCGTAAAGTTGAGGTGGTTCAACCTAAGAAAGAGGAAAAGAAAGAAGGAGGAGGAGAAAGTGGAGAGAAAGAAAACAAGGAAGAGGAAAATGGAAGAGGAGAAATGGAAGGTGAAGCTGAATTTATCAAAATTGATCACCATGGTTATGATTGTGGGTATAATGGTCATTTCATGTATCCACAAAATAATAATAATAATGGGTATGAAGGTTCCATGGTTGAGCCACTACCATTTATTATGCTTCCTCAGATTTATCCTCATCCACAAATGTTTAGTGATGAAAACCCTAATGCTTGTTCTGTCATGTGA 798 0.3947 MGEKEGGNKKNVVLKLDLHCEGCVMRIEKAVRHFEGVEDVKANMSSNELTVIGKVDSAMLRDKLAKKTRKKIEIVSQPPKEDAAAEESPEKKSEEENKPKKITVVLKTGMNCVCDGCIQKVHKLILKVKGVESASFGGNKESVTVEGTMNAEELVSYMNKKMKRKVEVVQPKKEEKKEGGGESGEKENKEEENGRGEMEGEAEFIKIDHHGYDCGYNGHFMYPQNNNNNGYEGSMVEPLPFIMLPQIYPHPQMFSDENPNACSVM* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0417 265 CDD HMA 18 66 IPR006121 GO:0046872
Lan9g0417 265 Gene3D - 97 176 - -
Lan9g0417 265 SUPERFAMILY HMA, heavy metal-associated domain 10 66 IPR036163 GO:0046872
Lan9g0417 265 ProSiteProfiles Heavy-metal-associated domain profile. 18 51 IPR006121 GO:0046872
Lan9g0417 265 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 3 265 - -
Lan9g0417 265 MobiDBLite consensus disorder prediction 83 97 - -
Lan9g0417 265 Gene3D - 7 82 - -
Lan9g0417 265 Pfam Heavy-metal-associated domain 17 71 IPR006121 GO:0046872
Lan9g0417 265 Pfam Heavy-metal-associated domain 114 165 IPR006121 GO:0046872
Lan9g0417 265 MobiDBLite consensus disorder prediction 168 198 - -
Lan9g0417 265 SUPERFAMILY HMA, heavy metal-associated domain 103 160 IPR036163 GO:0046872
Lan9g0417 265 MobiDBLite consensus disorder prediction 75 97 - -
Lan9g0417 265 CDD HMA 108 147 IPR006121 GO:0046872
Lan9g0417 265 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 3 265 IPR044594 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0417 Lan-Chr9 6033326 6035797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0417 - - lang:109356180 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0417 9 6033326 6035797 Lan5g1155 5 24840939 24843448 LSH
Lan9g0417 9 6033326 6035797 Lan19g0230 19 2336643 2338899 LSH