Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0230 ATGGGAGAGAAAAAAGAGCAACAGAAGAACGAGACGGAGAAGAAACCCGGTGGAGGAGATAAGAAAAACGACGCATCTGCCTCTGTCGTTTTGAAGCTTGAATTGCATTGCGGAGGATGTGTCAAGAAAATCAAAAAAGCCGTTCGCCATTTCGAAGGTGTGGAGGACGTTAAGGCTGATATTTCCGCTAGTAAACTAATCGTTATTGGAAAAGTGGACCCCGCTCAGGTACGTGATAATCTGGCGGCGAAAACGAAGAAGAAGGTTGATCTCGTTTCGCCTCAGCCGAAGAAAGATGCTGGCACCGGCGGCGAGAAACCGCCGGAGAAGAAGGCGGAAGAGGAGAAGACCGTAGAGAAAAGGACGGAAGCGAAAACACAAAAACAGAGAACGGTGGTTTTGAAGACCAGATTGCACTGTGACGGTTGCATTCAAAAAATTCGGAAGATTATCCTCAACTTCAAAGGAGCTGAATCGTTGAACATTGATGGAGGTAAGGATTTGATAACGGTTCAAGGAACAATGAACGTTAAAGATTTGTTACCATACCTTAGCGAGAAGCTGAAACGTAATGTTGAGGTGATCCCACCTAAGAAGGAAAAAGACAAAGACAAAGACATAGAAGGTGAAAAGAAAGTGAAAAAGAACAAAGACAAGGAGATTGTTGGTGACAATAATAAACAAAATGGAAAGAAAGAGGAAAGTGCAGTTAAGGTAGAGGTTAACAAAATGGAACACCATGGGTACGGATACGGGTATGGATATCCATCAGCTCCCATTTACGCGTACCCGTACGGACATGGTGAAAGTAGTGCTAGTACCGGGTATGCAATGGAGGTTCAGCCATCAGGGTATGATGGTAATTATCACGTGGATCAAGGATACAATCAACAACGTTATGGTTATGTTGAACAACCACCAATGTATATGCATACTCAAAATTATCCCCCTCCGCAGATGTTCAGTGATGAGAATCCTAATGCTTGTTCAATTATGTGA 999 0.4344 MGEKKEQQKNETEKKPGGGDKKNDASASVVLKLELHCGGCVKKIKKAVRHFEGVEDVKADISASKLIVIGKVDPAQVRDNLAAKTKKKVDLVSPQPKKDAGTGGEKPPEKKAEEEKTVEKRTEAKTQKQRTVVLKTRLHCDGCIQKIRKIILNFKGAESLNIDGGKDLITVQGTMNVKDLLPYLSEKLKRNVEVIPPKKEKDKDKDIEGEKKVKKNKDKEIVGDNNKQNGKKEESAVKVEVNKMEHHGYGYGYGYPSAPIYAYPYGHGESSASTGYAMEVQPSGYDGNYHVDQGYNQQRYGYVEQPPMYMHTQNYPPPQMFSDENPNACSIM* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0230 332 Gene3D - 124 202 - -
Lan19g0230 332 Gene3D - 25 99 - -
Lan19g0230 332 MobiDBLite consensus disorder prediction 1 25 - -
Lan19g0230 332 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 1 332 IPR044594 GO:0046872
Lan19g0230 332 ProSiteProfiles Heavy-metal-associated domain profile. 35 81 IPR006121 GO:0046872
Lan19g0230 332 MobiDBLite consensus disorder prediction 84 127 - -
Lan19g0230 332 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 332 - -
Lan19g0230 332 MobiDBLite consensus disorder prediction 102 127 - -
Lan19g0230 332 CDD HMA 35 89 IPR006121 GO:0046872
Lan19g0230 332 MobiDBLite consensus disorder prediction 1 21 - -
Lan19g0230 332 Pfam Heavy-metal-associated domain 137 193 IPR006121 GO:0046872
Lan19g0230 332 Pfam Heavy-metal-associated domain 34 87 IPR006121 GO:0046872
Lan19g0230 332 SUPERFAMILY HMA, heavy metal-associated domain 29 82 IPR036163 GO:0046872
Lan19g0230 332 MobiDBLite consensus disorder prediction 196 234 - -
Lan19g0230 332 SUPERFAMILY HMA, heavy metal-associated domain 129 192 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0230 Lan-Chr19 2336643 2338899 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0230 - - gmx:100795652 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0417 9 6033326 6035797 Lan19g0230 19 2336643 2338899 LSH
Lan5g1155 5 24840939 24843448 Lan19g0230 19 2336643 2338899 LSH