Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0414 ATGCCAGAGATGGACAATACATTCCTCTTCACCTCGGAGTCTGTAAATGAAGGCCACCCAGACAAGCTCTGTGACCAAGTCTCTGATGCAATCCTTGATGCTTGTTTGGAGCAAGATCCAGAGAGCAAGGTTGCTTGTGAAACATGTACTAAGACAAACATGGTTATGGTCTTTGGTGAGATCACAACCAAGGCTAAGGTGAACTATGAGAAAATTGTTAGGGACACTTGTAGGGGCATTGGATTCGTGTCGGCCGATGTTGGTCTTGATGCTGATAAGTGCAATGTTCTTGTCAACATTGAGCAACAAAGCCCTGATATAGCTCAAGGAGTTCATGGTCACATGACTAAAGCACCTGAGGATATTGGAGCTGGTGATCAAGGCCACATGTTCGGCTATGCGACCGATGAAACACCCGAGCTTATGCCACTCACTCATGTACTTGCTACTAAACTTGGTGCAAAACTCACTGAAGTTAGAAAGAACAAAACATGTCCATGGTTAAGGCCTGATGGTAAAACCCAAGTCACTGTTGAATATAGGAATGAAAATGGAGCCATGGTTCCTCTTAGGGTGCATACAGTCCTAATCTCAACTCAACATGATGAAACAGTCACAAATGAACAAATTGCTACAGACTTAAAAGAGCATGTTATAAAGCCTGTCATACCAGCTCAATACCTTGATGACAAGACAATATTTCATCTTAATCCTTCGGGTCGATTCGTGATTGGAGGACCTCATGGAGATGCTGGACTAACTGGTAGGAAGATTATTATCGACACGTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCCTTCTCTGGCAAGGATCCTACTAAGGTGGATAGGAGTGGTGCATACATTGTTAGACAGGCTGCGAAGAGTATCGTTGCTTCGGGCCTTGCTCGACGTTGTATTGTGCAGGTTTCATATGCAATTGGAGTGCCAGAACCATTATCTGTTTTTGTAGATACCTATAAAACAGGAAAGATTCCAGACAAGGACATTTTGGTTTTGATTAAGGACAACTTTGACTTTAGGCCAGGAATGATTGCTATTCATCTTGATCTTACTAGAGGAGGCAATTTCAGGTACCAAAAAACTGCAGCTTATGGACATTTTGGACGTGATGATCCTGATTTTACTTGGGAGACAATAAAGGCATTGAAGCCAAAAGCTTAA 1185 0.4312 MPEMDNTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADKCNVLVNIEQQSPDIAQGVHGHMTKAPEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNENGAMVPLRVHTVLISTQHDETVTNEQIATDLKEHVIKPVIPAQYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILVLIKDNFDFRPGMIAIHLDLTRGGNFRYQKTAAYGHFGRDDPDFTWETIKALKPKA* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0414 394 SUPERFAMILY S-adenosylmethionine synthetase 7 113 IPR022636 GO:0004478|GO:0006556
Lan9g0414 394 Gene3D - 8 246 - -
Lan9g0414 394 SUPERFAMILY S-adenosylmethionine synthetase 120 243 IPR022636 GO:0004478|GO:0006556
Lan9g0414 394 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 6 394 - -
Lan9g0414 394 Gene3D - 15 283 - -
Lan9g0414 394 Pfam S-adenosylmethionine synthetase, C-terminal domain 244 385 IPR022630 GO:0004478|GO:0006556
Lan9g0414 394 Pfam S-adenosylmethionine synthetase, central domain 121 242 IPR022629 GO:0004478|GO:0006556
Lan9g0414 394 Hamap S-adenosylmethionine synthase [metK]. 6 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan9g0414 394 PIRSF MAT 2 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan9g0414 394 Pfam S-adenosylmethionine synthetase, N-terminal domain 8 105 IPR022628 GO:0004478|GO:0006556
Lan9g0414 394 ProSitePatterns S-adenosylmethionine synthase signature 1. 123 133 IPR022631 GO:0004478|GO:0006556
Lan9g0414 394 TIGRFAM metK: methionine adenosyltransferase 9 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan9g0414 394 CDD S-AdoMet_synt 9 385 - -
Lan9g0414 394 Gene3D - 121 385 - -
Lan9g0414 394 ProSitePatterns S-adenosylmethionine synthase signature 2. 270 278 IPR022631 GO:0004478|GO:0006556
Lan9g0414 394 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 6 394 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan9g0414 394 SUPERFAMILY S-adenosylmethionine synthetase 244 390 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0414 Lan-Chr9 5989140 5991427 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0414 K00789 - csv:101222328 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0414 9 5989140 5991427 Lan5g0363 5 7345806 7348941 LSH
Lan9g0414 9 5989140 5991427 Lan19g0229 19 2328874 2331442 LSH
Lan11g1435 11 23405475 23407992 Lan9g0414 9 5989140 5991427 PCT