Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0229 ATGGACAATACCTTTCTCTTCACCTCAGAGTCCGTCAATGAGGGCCACCCCGACAAGCTCTGTGACCAGGTTTCAGATGCCATCCTCGATGCTTGCTTAGAGCAAGATCCAGAAAGCAAGGTTGCCTGTGAGACCTGTACAAAAACTAACATGGTTATGGTCTTTGGTGAGATCACAACCAAGGCTAAAGTGAACTATGAGAAGATTGTTAGAGACACTTGCAGGGGCATTGGCTTTGTGTCAGCTGATGTTGGTCTTGATGCAGACAAGTGCAATGTTCTTGTCAACATTGAGCAACAGAGCCCTGATATTGCCCAAGGAGTTCATGGTCACATGACCAAAGCACCTGAGGATATTGGAGCTGGTGACCAAGGCCACATGTTCGGCTATGCCACAGATGAAACACCTGAGCTTATGCCACTTACTCATGTGCTGGCTACTAAACTTGGGGCCAAGCTCACTGAAGTCAGAAAGAACAAAACCTGCCCATGGTTGAGGCCTGATGGTAAAACCCAAGTCACTGTTGAGTACAGGAATGACAATGGTGCCATGGTCCCTCTCCGTGTGCACACAGTCCTCATCTCAACTCAACATGATGAAACTGTTACAAATGAACAGATTGCAGCAGACTTGAAAGAACATGTGATTAAACCTGTGATCCCAACTCAATATCTTGATGACAAGACCATCTTCCACCTCAACCCCTCCGGTCGGTTTGTGATCGGAGGACCCCATGGAGATGCTGGTCTAACCGGTAGGAAGATCATTATCGACACCTATGGTGGTTGGGGTGCTCATGGTGGAGGTGCTTTCTCTGGAAAGGACCCTACGAAGGTGGATAGGAGTGGTGCATACATTGTTAGGCAGGCAGCGAAGAGTGTTGTAGCTTCAGGGCTTGCCCGCCGTTGTATTGTGCAGGTTTCTTATGCAATAGGAGTCCCAGAGCCGTTGTCTGTGTTTGTAGACACCTACAAAACAGGAAAGATTCCAGACAAGGACATCTTGGCTCTAATTAAGGAGAACTTTGACTTCAGGCCAGGAATGATTGCCATCCATCTTGACCTCACAAGAGGAGGCAACTTCAGGTACCAGAAGACTGCTGCTTATGGACATTTTGGACGCGATGATTCTGATTTTACTTGGGAGACAGTAAAGGCACTCAAGCCAAAGGCTTAA 1176 0.4762 MDNTFLFTSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKAKVNYEKIVRDTCRGIGFVSADVGLDADKCNVLVNIEQQSPDIAQGVHGHMTKAPEDIGAGDQGHMFGYATDETPELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMVPLRVHTVLISTQHDETVTNEQIAADLKEHVIKPVIPTQYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAIHLDLTRGGNFRYQKTAAYGHFGRDDSDFTWETVKALKPKA* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0229 391 Pfam S-adenosylmethionine synthetase, C-terminal domain 241 382 IPR022630 GO:0004478|GO:0006556
Lan19g0229 391 SUPERFAMILY S-adenosylmethionine synthetase 117 240 IPR022636 GO:0004478|GO:0006556
Lan19g0229 391 Hamap S-adenosylmethionine synthase [metK]. 3 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan19g0229 391 TIGRFAM metK: methionine adenosyltransferase 6 388 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan19g0229 391 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 3 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan19g0229 391 Gene3D - 5 243 - -
Lan19g0229 391 ProSitePatterns S-adenosylmethionine synthase signature 1. 120 130 IPR022631 GO:0004478|GO:0006556
Lan19g0229 391 Gene3D - 12 280 - -
Lan19g0229 391 SUPERFAMILY S-adenosylmethionine synthetase 241 387 IPR022636 GO:0004478|GO:0006556
Lan19g0229 391 Pfam S-adenosylmethionine synthetase, central domain 118 239 IPR022629 GO:0004478|GO:0006556
Lan19g0229 391 ProSitePatterns S-adenosylmethionine synthase signature 2. 267 275 IPR022631 GO:0004478|GO:0006556
Lan19g0229 391 PIRSF MAT 1 391 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan19g0229 391 Gene3D - 118 382 - -
Lan19g0229 391 SUPERFAMILY S-adenosylmethionine synthetase 4 110 IPR022636 GO:0004478|GO:0006556
Lan19g0229 391 CDD S-AdoMet_synt 6 385 - -
Lan19g0229 391 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 3 391 - -
Lan19g0229 391 Pfam S-adenosylmethionine synthetase, N-terminal domain 5 102 IPR022628 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0229 Lan-Chr19 2328874 2331442 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0229 K00789 - csv:101222328 755.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0414 9 5989140 5991427 Lan19g0229 19 2328874 2331442 LSH
Lan5g0363 5 7345806 7348941 Lan19g0229 19 2328874 2331442 LSH
Lan11g1435 11 23405475 23407992 Lan19g0229 19 2328874 2331442 PCT