Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan5g0363 ATGGAAACATTCCTCTTCACCTCGGAATCTGTTAACGAAGGCCACCCTGACAAGATTTGTGACCAGGTTTCAGATGCAATCCTTGATGCTTGCTTGGAGCAAGACCCAGAGAGCAAGGTTGCATGTGAGACCTGTACAAAAACTAACATGGTTATGGTATTTGGTGAAATCACAACCAAAGCAAATGTGAACTATGAGAAAATTGTGAGAGACACTTGCAGAGGCATTGGGTTCATATCACCTGATGTTGGCCTTGATGCTGATAACTGCAAAGTTCTTGTCAATATTGAGCAACAAAGCCCTGATATTGCCCAAGGAGTTCATGGTCATATGACCAAAAAGCCTGAGGATATTGGAGCTGGTGACCAAGGCCACATGTTTGGCTATGCTACAGATGAAACCCTTGAACTAATGCCACTTACTCATGTGCTTGCTACTAAACTTGGTGCTAAGCTCACTGAAGTCAGAAAGAATAACACATGCCCTTGGTTAAGGCCAGATGGTAAAACCCAAGTGACTGTTGAGTACAGGAATGATGGTGGAGCCATGGTCCCTCTCAGAGTGCACACAGTCCTAATCTCAACCCAACATGATGAAACTGTCACAAATGATCAAATTGCTAAGGACTTAAAAGATAATGTTATAAAACCTGTCATCCCAGCTGAATATCTTGATGACAAGACTATTTTCCACCTCAATCCTTCAGGTCGATTCGTGATTGGTGGACCGCATGGAGATGCAGGACTAACTGGTCGTAAGATCATTATTGACACCTACGGCGGGTGGGGTGCTCATGGTGGAGGTGCCTTCTCAGGCAAGGATCCAACGAAGGTTGATAGGAGTGGTGCGTACATTGTTAGACAAGCAGCAAAGAGTGTGGTAGCTTCAGGGCTCGCCCGTCGTTGTATTGTGCAAGTTTCTTATGCAATTGGAGTGCCAGAACCACTATCTGTTTTTGTAGACACCTACAAAACTGGAAAGATTCCAGATAAGGACATTTTGGCTTTGATTAAAGAGAATTTTGATTTCAGGCCAGGAATGATTGCTATCAATCTTGACCTTACAAGAGGAGGAAACTTTAGGTACCAAAAGACTGCTGCTTATGGACATTTTGGACGTGATGATCCTGATTTTACTTGGGAGACAGTGAAGATACTCAAGCCTAAGGCTTGA 1173 0.4373 METFLFTSESVNEGHPDKICDQVSDAILDACLEQDPESKVACETCTKTNMVMVFGEITTKANVNYEKIVRDTCRGIGFISPDVGLDADNCKVLVNIEQQSPDIAQGVHGHMTKKPEDIGAGDQGHMFGYATDETLELMPLTHVLATKLGAKLTEVRKNNTCPWLRPDGKTQVTVEYRNDGGAMVPLRVHTVLISTQHDETVTNDQIAKDLKDNVIKPVIPAEYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVPEPLSVFVDTYKTGKIPDKDILALIKENFDFRPGMIAINLDLTRGGNFRYQKTAAYGHFGRDDPDFTWETVKILKPKA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan5g0363 390 CDD S-AdoMet_synt 5 384 - -
Lan5g0363 390 ProSitePatterns S-adenosylmethionine synthase signature 2. 266 274 IPR022631 GO:0004478|GO:0006556
Lan5g0363 390 TIGRFAM metK: methionine adenosyltransferase 5 387 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan5g0363 390 ProSitePatterns S-adenosylmethionine synthase signature 1. 119 129 IPR022631 GO:0004478|GO:0006556
Lan5g0363 390 PANTHER S-ADENOSYLMETHIONINE SYNTHASE 2 1 390 - -
Lan5g0363 390 Pfam S-adenosylmethionine synthetase, central domain 117 238 IPR022629 GO:0004478|GO:0006556
Lan5g0363 390 Pfam S-adenosylmethionine synthetase, N-terminal domain 4 101 IPR022628 GO:0004478|GO:0006556
Lan5g0363 390 SUPERFAMILY S-adenosylmethionine synthetase 3 109 IPR022636 GO:0004478|GO:0006556
Lan5g0363 390 Hamap S-adenosylmethionine synthase [metK]. 2 390 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan5g0363 390 Pfam S-adenosylmethionine synthetase, C-terminal domain 240 381 IPR022630 GO:0004478|GO:0006556
Lan5g0363 390 Gene3D - 117 381 - -
Lan5g0363 390 Gene3D - 4 243 - -
Lan5g0363 390 PIRSF MAT 1 390 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan5g0363 390 SUPERFAMILY S-adenosylmethionine synthetase 115 239 IPR022636 GO:0004478|GO:0006556
Lan5g0363 390 Gene3D - 11 280 - -
Lan5g0363 390 PANTHER S-ADENOSYLMETHIONINE SYNTHETASE 1 390 IPR002133 GO:0004478|GO:0005524|GO:0006556
Lan5g0363 390 SUPERFAMILY S-adenosylmethionine synthetase 240 386 IPR022636 GO:0004478|GO:0006556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan5g0363 Lan-Chr5 7345806 7348941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan5g0363 K00789 - sind:105161359 759.985
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan9g0414 9 5989140 5991427 Lan5g0363 5 7345806 7348941 LSH
Lan5g0363 5 7345806 7348941 Lan19g0229 19 2328874 2331442 LSH
Lan11g1435 11 23405475 23407992 Lan5g0363 5 7345806 7348941 PCT