Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1829 ATGGAAACTCGGAGTCGGAAGCGGGCGGAGGCTTCCTCAGCTGCCCCTTCATCTTCCTCTTCTGGTCCCACCACTCGTTCAACCAAAAGCCCTCGTTTTTCTTCTTCTTCAACCACCGCGACATTAACCACCACTCCGACTCGCTCCGTCAACACTCGTTCCCGCGTATCCAGGACTAAGGAAGGTAAGGAGCCCTTGCCGCTTAAGAAATCTATTGCAATGGACTCTACCAATGAATCCTCTGGCTCCCGCGGTCGGCGTGGGAAGAACGCTGATAGGGATAATTCGGAAAAGGGAAAGGAGAAGGAGCATGATGTGAGGATCAGAGAAGCTGAGAGGGGGATTGCGTTGAACATGGAGAGTAGTGGCATTGGGGATGATAATGATAATGATAGCGAGGGTGGTACTGGGATGTTGCATCCGAATCTGACGTCAGCGAGTAGTGCTCTTCAAGGGCTTCTTCGGAAGCTAGGTGCTGGTTTGGATGATCTGCTTCCTTCGTCTGCTATGGGTTCTGCTTCGGCTTCGCATCAGAGTGGGAGGTTGAAGAAGATCTTATCTGGATTGAGGGCTGACGGAGAAGAAGGTCGCCAGGTCGAGGCATTGACTCAGCTTTGTGAAATGCTTTCGATTGGGACCGAGGAATCACTTAGTACTTTCTCGGTTGATTCATTTGTTCCGGTTCTTGTGGGATTGTTGAATCATGAGATTAATCCTGATATTATGCTTCTTGCGGCTAGGGCACTTACCCATTTGTGTGATGTGCTGCCTTCGTCATGTGCTGCTGTTGTGCATTATGGTGCAGTGTCAAATTTCTGCGCGAGACTGCTTACAATTGAGTATATGGATTTAGCTGAGCAGTCTCTTCAAGCTCTAAAAAAGATATCTCAGGAGCACCCGACTGCCTGCTTACGAGCTGGTGCTCTGATGGCTGTGCTTTCTTATCTGGATTTCTTCTCAACTGGAGTTCAGAGGGTGGCATTGTCTACTGCTGCAAATATGTGCAAAAAGCTTCCTTCAGATGCAGCTGATTTTGTGATGGAAGCAGTTCCTCTTTTGACAAACCTCCTTCAATACCATGATTCAAAGGTATTGGAGCATGCTTCAGTTTGTTTGACTCGAATAGCAGAAGCATTTGCATCATCTCCAGACAAATTAGATGAATTGTGCAATCATGGACTAGTAACACAAGCTGCTTCTCTCATTTCTACCAGCAGTTCTGGTGGTGGACAGGCTTCTCTCAGCTCATCAACATATACTGGTCTTATCCGGCTTCTTTCAACTTGCGCAAGTGGGTCCCCTCTTGGAGCTAAAACTTTGCTTCTCCTGGGAATTAGCGGCATTCTTAAAGATACTCTCTCTGATTCTAGAGTTTCTTCTAATGCCTCTGTTTCTCCTACATTGAGCAGGCCACCAGATCAGATATTTGAGATTGTGAACCTGGCAAATGAGCTTCTGCCTCCATTGCCACAAGGAATAATTTCCCTTCCAGTCAGCTTGAACTTGTTTGTGAAAGGGCCCCTTGTAAAAAAGCCTCATGCTGGCAGTTCTGGGAAACAGGAGGAGACAAATGGAAATGTTCCTGAGATATCGGCTCGTGAGAAGCTATTAAATGATCAGCCTGAGCTGCTTCAGCAATTTGAGATGGATCTCCTCCCAGTTTTGATACAGGTATACGGTTCTAGTGTCAATGGTCCGGTTCGGCACAAATGTCTGTCTGTCATTGGAAAATTGATGTATTTCAGCACTGCAGATATGATCCAGACTTTATTGAGTGTAACTAATATGTCAAGTTTCTTAGCTGGTGTCTTAGCATGGAAAGATCCACATGTTTTACTTCCTGCTTTGCAAATTGCTGAAATTCTTATGGAAAAGCTTCCTGGGACATTCGCGAAGATGTTTATCAGAGAGGGTGTTGTGCATGCGGTGGACCTACTTATTTTGGCTGGAAACCCAACAAATGTCCCTACCCAAACATCTTTTGCTGATAAAGACAATGATTCTGTATCTGGACCATCATCTCGTTCTAGGCGTTATCGGCGACGCAGCGGTAACTCCAATCCTGACGGAAATCCTTTGGATGATTTGAAGAGTCCAGTTTCAGTAAATGTTGGTTCGCCACCAAGCTCTGTGGATATTACAACAACAAATTCTAGTATTCGATTATCCGTTAGTGCAGCTGCTAGAGCTTTTAAAGATAAGTACTTTCCATCTGATCCCGGGGCTATTGAAGTTGGTGTTACTGATGATCTTTTGCACCTGAAAAATCTTTGCATGAAGTTAAATGCTAGTGTTGATGACCAAAGAACGAATGGGAAGTCTAAAACTTCTGAAGTTCTTCTGAAAGAGAATTCTGCTAACAAAGAAGAGTATTTAATTGGGGTGATATCTGACATGCTGAAGGAACTTGGCAAAGGAGATGGTGTATCCACTTTCGAATTTATTGGGAGTGGTGTCGTTGCAGCTTTGCTGAATTATTTTTCTTGTGGATGTTTCTCTCAAATATCTGAAACCAACTTGCCCAAGCTCCACAAACAAGCACTTACGAGGTTTAAGTCATTTATAGCTGTTGCACTACCTGCCAGTACTGGCCATGAGGCCATTGCTCCTATGTCTGTCCTAGTCCAGAAGCTTCAAAGTGCTTTGTCCTCCTTGGAGCGTTTCCCTGTTGTGCTCAGTCATTCAGCTAGGTCATCTACTGGAAGCACACGGCTCTCATCTGGACTAAGTGCATTATCACATCCCTTCAAGTTGCGTCTTTGTCGAGCCCAGGGTGAAAAGTCACTTCGGGATTATTCATCCAATGTTGTATTAATTGATCCATTAGCAAGTTTAGCAGCCATTGAGGAATTTCTTTGGCCCCGTATCCAGCGTAGTGAATCTGCCCAAAAGTCAACTGTTCCTGTGGGGAATTCTGAATCTGGGACAACTGCTGGAACGGGTGTTTCATCTCCTTCCGCTTCTACCCCTTCAACTACTCGTCGCCATTCTACTAGATCCAAATTATCTGTTAATATAGGTGATACGCCCAAAAAAGAAGTTGCTCAAGATAAGAGCATGAGCTCATCTAAGGGCAAGGGAAAAGCTGTATTAAAGCCTTCCCAGGAAGAGACAAGAGGGCCTCAAACCAGGAATGCTACACGTAGAAGAGAAGCTCTTGACAAAGATGCTCAAATGAAGCCTCTAAATGGTGACTCTACTTCTGAGGATGAAGATTTGGATATATCTCCCGTTGAGATTGATGAGGCATTGATGATTGATGATGATGATGAAGAAGACGATGATGATATTTCTGATGATGAAGACGATGACCATGAAGATGACCTGGGGGATGTTTCTCTTCCTGTTAGCCTGCCGGACAAAGTACATGATGTGAAATTGGGTGACTCTGCTGAGAGCACTGTTGCTCCTGCAACAAGTGATGGCCAGACTAATGCAGCCTCAGGCTCTAGTAGCAAAGTTGGTACAGCCAGGCGATCAGACAATGCTGAGTTTAGGAGTGGCTATTCTTCTACCTCAAGGGGTGCATTGTCATTTGCTGCTGCCGCTATGGCTGGACTTGGGTCTGTTAATAGCAGAGGTATCCGCGGTGGCAGAGATAGGCATGGACGTCCATTGTCAGGTGGTTCTAATGATCCTCCTAAGTTGATCTTCACCGCTGGCGGGAAGCAGCTTAATAGGCATTTGACTATATATCAGGCAATTCAGAGACAGCTTGTGGTAGATGAAGATGATGAAGAGAGATTCACTGGCAGTGACTTTGTATCTAGTAATGGAAGCAGGTTGTGGGGAGATATTTATACTATAACTTATCAGAGGTCTGAGAATCAAACGAACAGAGCTTCTGCTGGAGGTTCAAGTTTAAATGTTTCAAAATCTGCAAAATCTGCGCCTGCATCAAATTCTAATTCTGAAGCCAAGCTGCAACAAACTTCCGTTCTTGATAGCATCTTGCAGGGAGAATTGCCCTGTGAACTGGAGAAATCTAATCCTACATACAACATATTGGCACTGTTGCGTGTACTGGAGGGTTTGAACCAACTAGCACCTCGTTTAAGGGCTCAGGTGGCTACTGATAGTTTTGCTGTTGGAAATACTTCGGATTTGGACGAGCTAGGTGTTACCGGTGGTGCTAGGGTTCCTCCTGAGGAATTCATCAGCAGCAAGCTCACTCCAAAGTTAGCTAGGCAAATGCAAGATGCCCTAGCATTATGCAGTGGGAGTCTCCCCTCGTGGTGTTACCAGTTAACTAAAGCATGCCCTTTTTTGTTTCCTTTTGAGACCCGGCGACAGTACTTCTATTCAACTGCCTTTGGGTTATCTCGTGCACTGCATCGACTGCAGCAGCAACAAGGTGCAGATGGCCATGGATCAACAAATGAAAGAGAGGTGAGGGTTGGGAGATTACAGCGCCAGAAGGTTCGTGTTTCTCGAAATCATATTTTGGATTCTGCTGCTAAAGTGATGGAGATGTATTCTAGCCAAAAGGCTGTACTTGAAGTAGAATATTTTGGTGAAGTTGGCACTGGCCTCGGTCCCACCCTTGAGTTTTATACACTTTTAAGTCACGACTTGCAAAAAGTTGGACTACAAATGTGGAGATCGGATTCTTCAGAGAAATATCAAATGGAAATTGATGGAAACGAAAAGAAAAGTAAAAGCGTTGAAAGCTCTTTTGCTGGAGATGGGGAACTTGTTCAGTCACGTCTTGGGTTGTTTCCTCGTCCTTGGCCTGCAAATTCCGATGCATCAGAGGGCAGCCAGTTCTATAAAGTGATTGAGTTTTTCCGGTTGGTAGGCCGTGTAGTTGCTAAAGCTCTTCAAGATGGACGCTTATTGGATTTGCCATTGTCAGTGGCATTTTATAAGCTCGTTCTTGGCCAAGAGCTTGATTTGTATGACATTCTTGTTATTGACACTGAGCTTGGAAAAACTTTGCAAGAGTTGAACGCCCTTGTTTGCCGGAAAAGTTATTTAGAATCTGGTGGCAGCTTTACTGACAAAGTTGCTAATTTACATTTTCGTGGCGCCCCAATTGAAGAGCTCTTCTTGGATTTTACACTTCCTGGTTATCCAGAATACATTTTGAAACCCGGAAGTGAAATTGTTAACATCAATAATTTGGAGGAGTACATATCTGCTGTGGTTGATGCAACTGTCAAGACTGGAATTATGCGTCAAATAGAAGCATTTAGAGCAGGATTCAATCAGGTTTTTGACATTTCAACTCTACAAGTTTTTACTCCCCAAGAACTGGACTATTTGCTTTGTGGTCGTAGAGAGATGTGGAAGGCTGAGACACTAGTCGACCATATAAAGTTTGACCATGGGTACACTGCCAAGAGCCCTGCTATAGTTAATTTACTTGAAATAATGGGAGAGTTCACACCTGAGCAGCAGCGTTCCTTCTGTCAATTTGTTACTGGTGCACCTAGGTTGCCATCTGGTGGACTGGCTGTTCTAAATCCAAAACTAACGATCGTGAGGAAGCTTTCATCAACGGCAGCTAATGTTTCATCTAATGGGAATGTACCTTCTGAATCAGCAGATGATGACTTGCCAAGTGTGATGACATGTGCTAATTACCTGAAGCTTCCTCCTTACTCGACCAAGGAAATTATGTACAAGAAGCTACTCTATGCAATCAGTGAAGGCCAGGGATCCTTTGATTTATCATGA 5679 0.445 METRSRKRAEASSAAPSSSSSGPTTRSTKSPRFSSSSTTATLTTTPTRSVNTRSRVSRTKEGKEPLPLKKSIAMDSTNESSGSRGRRGKNADRDNSEKGKEKEHDVRIREAERGIALNMESSGIGDDNDNDSEGGTGMLHPNLTSASSALQGLLRKLGAGLDDLLPSSAMGSASASHQSGRLKKILSGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHEINPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSNFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQASLSSSTYTGLIRLLSTCASGSPLGAKTLLLLGISGILKDTLSDSRVSSNASVSPTLSRPPDQIFEIVNLANELLPPLPQGIISLPVSLNLFVKGPLVKKPHAGSSGKQEETNGNVPEISAREKLLNDQPELLQQFEMDLLPVLIQVYGSSVNGPVRHKCLSVIGKLMYFSTADMIQTLLSVTNMSSFLAGVLAWKDPHVLLPALQIAEILMEKLPGTFAKMFIREGVVHAVDLLILAGNPTNVPTQTSFADKDNDSVSGPSSRSRRYRRRSGNSNPDGNPLDDLKSPVSVNVGSPPSSVDITTTNSSIRLSVSAAARAFKDKYFPSDPGAIEVGVTDDLLHLKNLCMKLNASVDDQRTNGKSKTSEVLLKENSANKEEYLIGVISDMLKELGKGDGVSTFEFIGSGVVAALLNYFSCGCFSQISETNLPKLHKQALTRFKSFIAVALPASTGHEAIAPMSVLVQKLQSALSSLERFPVVLSHSARSSTGSTRLSSGLSALSHPFKLRLCRAQGEKSLRDYSSNVVLIDPLASLAAIEEFLWPRIQRSESAQKSTVPVGNSESGTTAGTGVSSPSASTPSTTRRHSTRSKLSVNIGDTPKKEVAQDKSMSSSKGKGKAVLKPSQEETRGPQTRNATRRREALDKDAQMKPLNGDSTSEDEDLDISPVEIDEALMIDDDDEEDDDDISDDEDDDHEDDLGDVSLPVSLPDKVHDVKLGDSAESTVAPATSDGQTNAASGSSSKVGTARRSDNAEFRSGYSSTSRGALSFAAAAMAGLGSVNSRGIRGGRDRHGRPLSGGSNDPPKLIFTAGGKQLNRHLTIYQAIQRQLVVDEDDEERFTGSDFVSSNGSRLWGDIYTITYQRSENQTNRASAGGSSLNVSKSAKSAPASNSNSEAKLQQTSVLDSILQGELPCELEKSNPTYNILALLRVLEGLNQLAPRLRAQVATDSFAVGNTSDLDELGVTGGARVPPEEFISSKLTPKLARQMQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQQQGADGHGSTNEREVRVGRLQRQKVRVSRNHILDSAAKVMEMYSSQKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKVGLQMWRSDSSEKYQMEIDGNEKKSKSVESSFAGDGELVQSRLGLFPRPWPANSDASEGSQFYKVIEFFRLVGRVVAKALQDGRLLDLPLSVAFYKLVLGQELDLYDILVIDTELGKTLQELNALVCRKSYLESGGSFTDKVANLHFRGAPIEELFLDFTLPGYPEYILKPGSEIVNINNLEEYISAVVDATVKTGIMRQIEAFRAGFNQVFDISTLQVFTPQELDYLLCGRREMWKAETLVDHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRSFCQFVTGAPRLPSGGLAVLNPKLTIVRKLSSTAANVSSNGNVPSESADDDLPSVMTCANYLKLPPYSTKEIMYKKLLYAISEGQGSFDLS* 1893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1829 1892 MobiDBLite consensus disorder prediction 657 711 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 85 114 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 1277 1307 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 960 1005 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 1042 1058 - -
Lan8g1829 1892 SMART arm_5 213 254 IPR000225 GO:0005515
Lan8g1829 1892 SMART arm_5 296 336 IPR000225 GO:0005515
Lan8g1829 1892 SMART arm_5 339 377 IPR000225 GO:0005515
Lan8g1829 1892 Gene3D Hect, E3 ligase catalytic domain 1763 1890 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 10 53 - -
Lan8g1829 1892 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 71 1892 IPR045322 GO:0006511|GO:0061630
Lan8g1829 1892 MobiDBLite consensus disorder prediction 1133 1170 - -
Lan8g1829 1892 Gene3D Hect, E3 ligase catalytic domains 1411 1655 - -
Lan8g1829 1892 SUPERFAMILY ARM repeat 181 647 IPR016024 -
Lan8g1829 1892 SMART hect_3 1483 1892 IPR000569 GO:0004842
Lan8g1829 1892 MobiDBLite consensus disorder prediction 1190 1215 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 123 143 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 960 1170 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 1 143 - -
Lan8g1829 1892 Pfam HECT-domain (ubiquitin-transferase) 1520 1892 IPR000569 GO:0004842
Lan8g1829 1892 Gene3D - 178 653 IPR011989 -
Lan8g1829 1892 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 71 1892 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 1068 1109 - -
Lan8g1829 1892 CDD HECTc 1472 1887 IPR000569 GO:0004842
Lan8g1829 1892 SUPERFAMILY Hect, E3 ligase catalytic domain 1464 1885 IPR035983 GO:0004842
Lan8g1829 1892 MobiDBLite consensus disorder prediction 657 673 - -
Lan8g1829 1892 MobiDBLite consensus disorder prediction 54 68 - -
Lan8g1829 1892 ProSiteProfiles HECT domain profile. 1593 1892 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1829 Lan-Chr8 24712134 24723219 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1829 K10590 - gmx:100783336 2896.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0113 7 648416 659041 Lan8g1829 8 24712134 24723219 LSH
Lan8g1829 8 24712134 24723219 Lan13g0179 13 1097824 1108718 LSH