Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan7g0113 ATGGAAACTCGGAGTCGTAAGCGGGCCGAGGCTTCATCCTCCTCATCTGGTCCCACAACTCGTTCAAGCAAGCGCTCTCGTCTTAATTCTTCTTCTGCCACCGCAATCGCCGCCACAACCACCACCGCATCAACAATAACTCCGTCTCGTTCCGTCAACACTCGTTCCCGCGCATCTAGGACTAAGGAAACTAAGGAAACATTGCCGTCTAGAATCACTACTCCAATGGACTCCAACAACGAATCCTCTGGCTCACGTGGTCGCCGCGGTGGTAAGAACACCGATAGGGACAATTCTGACAAAGGAAAAGAGAAGGAGCACGATGTGAGGATCAGGGAAGCGGAGAGGGGGGTTGGATTGAACATGGAAAGTAGCGGGGTCGGCGATGAGGATGATAACGACAGCGAGGGTGGTGTTGGGATGTTTCATCAGAATCTTACGTCAGCTAGTACCGCTCTTCAAGGGCTTCTTCGGAAACTGGGTGCTGGTTTGGATGATTTGCTTCCTTCGGCCGCGATGGGTTACACATTATCTCCTCATCAGAGTGGGAGGTTGAAGAAAATCCTTGCTGGATTGCGTGCTGATGGGGAAGAAGGTCGCCAGGTTGAGGCATTGACTCAGCTATGTGAAATGCTTTCGATTGGGACCGAGGAATCACTCAGTACTTTCTCGGTTGATTCATTTGTTCCGGTACTGGTTGGGTTGTTGAATCATGAGAGCAATCCTGATATCATGCTTCTTGCTGCTAGGGCGCTGACACATCTATGTGATGTACTACCTTCATCGTGTGCTGCGGTTGTGCATTATGGTGCAGTGTCAATTTTCTGTGCGAGGTTGCTTACAATTGAGTATATGGACTTAGCTGAGCAGTCTCTTCAAGCTCTAAAGAAGATATCTCAGGAGCATCCTACTGCCTGCTTACGAGCTGGTGCTCTTATGGCTGTGCTTTCTTATTTGGATTTCTTCTCAACTGGGGTTCAGAGGGTGGCATTATCTACTGCTGCAAATATGTGCAAGAAGCTTCCTTCAGATGCAGCTGATTTTGTGATGGAAGCAGTTCCTCTTTTAACAAACCTCCTTCAGTATCATGATTCCAAGGTCTTGGAGCATGCTTCTGTTTGTTTGACTCGAATAGCTGAAGCATTTGCATCATCACCAGACAAATTAGATGAATTATGCAATCATGGACTAGTAACACAAGCTGCCTCTCTCATTTCCACCAGCAGTTCTGGTGGTGGACAAACTTCTCTCAGCACGTCAACATATACTGGTCTAATCCGGCTTCTTTCAACCTGTGCGAGTGGGTCTCCTCTAGGAGCCAAAACTTTGCTTCTCCTTGGAATTAGTAGCATTCTCAAAGATATTCTCTCTGGTTCTGGAGTTTCTTCTAATGCCTCTGTTTCTCCTGCATTGAGTAGGCCACCAGATCAGATATTTGAGATTGTAAATTTGGCAAATGAACTTCTGCCCCCATTGCCACAAGGAACAGTTTCTCTTCCAGTCAGTTTGAACTTATTTGTGAAAGGGCCTGTTGTAAGAAGGTCTCCCGCTGGCAGTTCTGTGAAACAAGAAGAGACAAATGGAAGTGTTCCTGAGGTTTCGGCTCGTGAGAAGCTATTAAATGATCAGCCTGAGCTACTTCAGCAATTTGAGATGGATCTCCTCCCAGTTTTAATACAGATATATGGTTCAAGTGTCAATGGTCCTGTTCGTCACAAATGTCTGTCTGTCATTGGAAAATTAATGTATTTCAGCACTGCAGAGATGCTCCAAACTTTATTGAGTGTAACCAACATATCAAGTTTCTTAGCTGGTGTCTTAGCATGGAAAGATCCACATGTTTTAGTCCCTGCTTTGCAAATTGCTGAAATTCTTATGGATAAGCTTCCTGGGACGTTCTCTAAGATGTTTATCAGAGAGGGTGTTGTCCATGCAGTGGACCAACTTATTTTGGTTGGAAACCCAACCAATGTCACCACCCAAGCTTCTTCTGCTGAGAAAGACAATGATTCTGTATCTGGACCATCATCTCGTTCTAGGCGTTACCGGAGACGCAGTGGTAACTCCAATCCTGATGGAAATCAGTTGGATGAATTGAAGAGTCCAGTTTCGGTAAATGTTGGTTCTCCACCAGGCTCTGTGGATGTTCCAACAACAACAACAAATTCTAGCATTCGGCTATCCGTTAGTGCAGCTGCTAGAGCTTTTAAAGATAAGTACTTTCCTTCTGATCCCGGGGCTATTGAAGTGGGTGTTACTGATGATCTTTTGCATCTGAAAAATCTTTGCATGAAATTAAATGCTAGTGTTGATGTCGAAAGGATGATGGGAAAGCAGAAATCTAAAACTTCTGCATTTGGTCTGGAAGAGAATTCTGATAACAAAGAAGAGTATTTAATTGGGGTGATATCTGACATGCTGAAAGAACTTGGCAAAGGAGATGGTGTATCCACTTTTGAATTTATTGGGAGTGGTGTTGTTGCAGCTTTGCTGAATTATTTTACTTGTGGGTGTTTCTCTGAAGATCGAATATCAGAAACCAACTTGCCCAAGCTTCGCCAGCAAGCACTTAAAAGGTTCAAGTCATTTATAGCTGTTGCACTTCCTGCCAGTACTGGTGATGAGGCTATAGCTCCTTTGTCTGTCCTAGTTCAGAAGCTTCAAAATGCTTTGTCCTCCATGGAGCGTTTTCCTGTTGTGCTTAGTCATTCAGCTAGGTCATCTAGTGGAAGCGCACGACTCTCCTCTGGACTAAGTGCATTATCACAGCCCTTGAAGTTGCGTCTTCGTCGTGCCCAGGGTGAAAAGTCACTTAGAGATTATTCATCCAATATTGTACTGATTGATCCATTAGCAAGTCTAGCAGCTATTGAGGAATTTCTTTGGCCTCGTATCCAGCGAAGTGAATCTTCCCAAAAGTCAACTCTACCTGTGGGGAATTCTGAATCTGGGACCACTGATGGGACTGGTATTTCATCTCCTTCCACTTGTCCTCCATCAGCTACTCGCCGTCTTTCTACTAGATCCAGATCATCTGTTAATATAGGTGATACACCCAAAAAAGACAAAATTCAAGACAAGAGTGCAAGCTCATCTAAGGGCAAGGGAAAAGCGGTATTGAAGTCTGCACAAGAAGAGGCAAGAGGGCCTCAAACCAGGAATGCTGCACGTAGAAGAGCAGCTCTTGACAAAGAGGCTCAAATGAAGCCTGTACATGGCGACTCTACTTCTGAGGATGAAGATTTGGATATATCTCATGTTGAGATTGACGAGGCATTGATGATTGATGATGATGATGATGAAGATATTTCTGATGATGATGATGATGACCATGAAGATATGTTGAGCGATGTTTCTCTCCCTGTTTGTTTGCCTGACAAAGTACATGATGTGAAATTGGATGACTCTGCTGAGGAGAGCATAGTTGCTCCTGTAACAAGTGATGGCCAGACTGATGCAGCTTCGGGTTCTAGTACCAAACTTGGTACAGCCAAGCGATCAGACACTGCTGTGTTTAGGGGTGGCCATTCTTCTAGCTCAAGGGGTGCATTGTCATTCGCTGCTGCTGCTATGGCTGGACTCGGATCTGTTAATACCAGAGGTATCAGGGGTGGCAGAGATAGGCATGGGCGCCCGTTGTTTGGTGGGTCTAATGATACTCCGAAGTTGATCTTCAATGCTGGCGGGAAGCAGCTTAATAGGCAATTGACTATATATCAGGCAATTCAGAGACAACTTGTGGTAGATGAAGATGATGAAGAGAGGTTCACTGACAATGACTTCGTATCTAGTGATGGAAGCAGGTTGTGGGGAGATATTTACACTATAACTTATCAGAGGGCTGAGAACCAAATGGACAGGGCTTCTGCTGGTGGTTCAATTTTAAATGTTTCGAAATCTGGAAAATCTGGGTCTTCATCAAATTCTAGTTCTGAAGCCAAGCTGCATCAAATTTCCGTGCTTGATAGCATCTTGCAGGGGGAATTGCCCTGTGAGCTGGAGAAATCTAATCCTACATACAACATATTGGCACTATTGCGTGTGCTGGAGGGTTTGAACCAGTTAGCACCTCGTTTAAGGGCCCAGGTGGTTACTGATAGCTTCGCTGTGGGTAAAACTTCAGATTTAGATGAGCTAGGTGTCACCAGTGGTGCTAGGGTTCCTCCAGAGGAATTCATCAGCAGCAAGCTTACTCCAAAGTTAGCTAGGCAAATGCAAGATGCCCTAGCATTATGCAGTGGGAGTCTTCCGTCGTGGTGTTACCAGTTAACTAAAGCCTGCCCTTTTTTGTTTCCTTTTGAGACCCGGCGACAGTACTTCTATTCAACTGCCTTTGGGTTATCTCGTGCACTGCATCGACTGCAGCAGCAACAAGGTGCAGATGGGCATGGATCAACAAATGAAAGAGAGGTGAGGGTCGGGAGATTGCAGCGCCAGAAGGTTCGTGTTTCTCGAAATCATATTTTGGATTCTGCTGCTAAAGTGATGGAGATGTATTCTAGCCACAAGGCTGTACTTGAAGTAGAATATTTTGGTGAAGTTGGCACCGGCCTTGGTCCCACCCTTGAGTTTTATACACTTTTAAGTCACGACTTGCAAAAATCTCGACTGCAAATGTGGAGATCCGATTCTTCAGAGCAATATCAAATGGAAATTGATGGAAATGAAAAGAAAAGTAAAAGCATCGATAGCTCTTTTGCCGGAGATGGAGAACTTGTCCAGTCTCGTCTTGGGTTGTTCCCGCGTCCATGGCCTGTAAATTCCAATGCATCTGAGGGTAGTCAGTTTTATAAAGTGATAGAGCATTTCCGGTTGGTAGGTCGTGTAGTTGCTAAAGCTCTTCAAGATGGTCGCCTATTGGATTTGCCGTTGTCTGTGGCATTTTACAAGCTTGTTCTGGGTCAAGAGCTTGATTTGCATGACATTCTTGTTATTGATGCTGAGCTTGGGAAAACTTTGCAAGAGTTGAATGCCATTGTATGCCGGAAAAGTTATTTAGAACCTGGTGGTAGCTATGCTGATAAAATTGCTCATTTACATTTTCGTGGGGCCCCAATTGAAGATCTTTGCTTGGATTTTACACTTCCTGGTTATCCAGAATACATTTTGAAACCTGGAAATGAAATTGTTGACATCAATAATTTGGAGGTGTACATATCCATGGTGGTTGATGCAACTGTCAAGACTGGAATCATGCGTCAAATAGAAGCATTTAGGGCAGGATTCAATCAGGTTTTTGACATTTCAACTCTACAAATTTTTACTCCCCTAGAACTGGACTACTTGCTTTGCGGTCGTAGAGAGATGTGGAAGGCTGATACACTAGGTGATCATATAAAGTTCGACCATGGGTACACTGCCAAGAGCCCTGCTATTGTTAATTTACTTGAAATAATGGGAGAGTTCACACCAGAGCAGCAGCGTGCCTTCTGTCAATTTGTTACTGGTGCACCTAGGTTGCCACCTGGTGGACTGGCTGTTCTAAATCCAAAACTAACGATCGTGAGGAAGCTTTCATCAGCTGCAGCTAATGTTTCATCTAACGGGAATGGACCTTCCGAATCAGCTGATAATGACTTGCCAAGTGTGATGACATGTGCTAATTACCTGAAGCTTCCTCCTTACTCTACCAAGGAAATTATGTACAAGAAGCTACTATATGCAATCAGTGAAGGCCAGGGATCCTTTGATTTATCATGA 5700 0.4451 METRSRKRAEASSSSSGPTTRSSKRSRLNSSSATAIAATTTTASTITPSRSVNTRSRASRTKETKETLPSRITTPMDSNNESSGSRGRRGGKNTDRDNSDKGKEKEHDVRIREAERGVGLNMESSGVGDEDDNDSEGGVGMFHQNLTSASTALQGLLRKLGAGLDDLLPSAAMGYTLSPHQSGRLKKILAGLRADGEEGRQVEALTQLCEMLSIGTEESLSTFSVDSFVPVLVGLLNHESNPDIMLLAARALTHLCDVLPSSCAAVVHYGAVSIFCARLLTIEYMDLAEQSLQALKKISQEHPTACLRAGALMAVLSYLDFFSTGVQRVALSTAANMCKKLPSDAADFVMEAVPLLTNLLQYHDSKVLEHASVCLTRIAEAFASSPDKLDELCNHGLVTQAASLISTSSSGGGQTSLSTSTYTGLIRLLSTCASGSPLGAKTLLLLGISSILKDILSGSGVSSNASVSPALSRPPDQIFEIVNLANELLPPLPQGTVSLPVSLNLFVKGPVVRRSPAGSSVKQEETNGSVPEVSAREKLLNDQPELLQQFEMDLLPVLIQIYGSSVNGPVRHKCLSVIGKLMYFSTAEMLQTLLSVTNISSFLAGVLAWKDPHVLVPALQIAEILMDKLPGTFSKMFIREGVVHAVDQLILVGNPTNVTTQASSAEKDNDSVSGPSSRSRRYRRRSGNSNPDGNQLDELKSPVSVNVGSPPGSVDVPTTTTNSSIRLSVSAAARAFKDKYFPSDPGAIEVGVTDDLLHLKNLCMKLNASVDVERMMGKQKSKTSAFGLEENSDNKEEYLIGVISDMLKELGKGDGVSTFEFIGSGVVAALLNYFTCGCFSEDRISETNLPKLRQQALKRFKSFIAVALPASTGDEAIAPLSVLVQKLQNALSSMERFPVVLSHSARSSSGSARLSSGLSALSQPLKLRLRRAQGEKSLRDYSSNIVLIDPLASLAAIEEFLWPRIQRSESSQKSTLPVGNSESGTTDGTGISSPSTCPPSATRRLSTRSRSSVNIGDTPKKDKIQDKSASSSKGKGKAVLKSAQEEARGPQTRNAARRRAALDKEAQMKPVHGDSTSEDEDLDISHVEIDEALMIDDDDDEDISDDDDDDHEDMLSDVSLPVCLPDKVHDVKLDDSAEESIVAPVTSDGQTDAASGSSTKLGTAKRSDTAVFRGGHSSSSRGALSFAAAAMAGLGSVNTRGIRGGRDRHGRPLFGGSNDTPKLIFNAGGKQLNRQLTIYQAIQRQLVVDEDDEERFTDNDFVSSDGSRLWGDIYTITYQRAENQMDRASAGGSILNVSKSGKSGSSSNSSSEAKLHQISVLDSILQGELPCELEKSNPTYNILALLRVLEGLNQLAPRLRAQVVTDSFAVGKTSDLDELGVTSGARVPPEEFISSKLTPKLARQMQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQQQQGADGHGSTNEREVRVGRLQRQKVRVSRNHILDSAAKVMEMYSSHKAVLEVEYFGEVGTGLGPTLEFYTLLSHDLQKSRLQMWRSDSSEQYQMEIDGNEKKSKSIDSSFAGDGELVQSRLGLFPRPWPVNSNASEGSQFYKVIEHFRLVGRVVAKALQDGRLLDLPLSVAFYKLVLGQELDLHDILVIDAELGKTLQELNAIVCRKSYLEPGGSYADKIAHLHFRGAPIEDLCLDFTLPGYPEYILKPGNEIVDINNLEVYISMVVDATVKTGIMRQIEAFRAGFNQVFDISTLQIFTPLELDYLLCGRREMWKADTLGDHIKFDHGYTAKSPAIVNLLEIMGEFTPEQQRAFCQFVTGAPRLPPGGLAVLNPKLTIVRKLSSAAANVSSNGNGPSESADNDLPSVMTCANYLKLPPYSTKEIMYKKLLYAISEGQGSFDLS* 1900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan7g0113 1899 Gene3D - 186 664 IPR011989 -
Lan7g0113 1899 SMART arm_5 299 339 IPR000225 GO:0005515
Lan7g0113 1899 SMART arm_5 216 257 IPR000225 GO:0005515
Lan7g0113 1899 SMART arm_5 342 380 IPR000225 GO:0005515
Lan7g0113 1899 MobiDBLite consensus disorder prediction 1141 1176 - -
Lan7g0113 1899 Gene3D Hect, E3 ligase catalytic domain 1770 1897 - -
Lan7g0113 1899 Gene3D Hect, E3 ligase catalytic domains 1418 1662 - -
Lan7g0113 1899 MobiDBLite consensus disorder prediction 88 117 - -
Lan7g0113 1899 MobiDBLite consensus disorder prediction 10 55 - -
Lan7g0113 1899 MobiDBLite consensus disorder prediction 1092 1114 - -
Lan7g0113 1899 ProSiteProfiles HECT domain profile. 1600 1899 IPR000569 GO:0004842
Lan7g0113 1899 MobiDBLite consensus disorder prediction 1143 1165 - -
Lan7g0113 1899 Pfam HECT-domain (ubiquitin-transferase) 1526 1899 IPR000569 GO:0004842
Lan7g0113 1899 MobiDBLite consensus disorder prediction 968 1014 - -
Lan7g0113 1899 PANTHER HECT E3 UBIQUITIN LIGASE-RELATED 58 1899 - -
Lan7g0113 1899 SUPERFAMILY Hect, E3 ligase catalytic domain 1471 1892 IPR035983 GO:0004842
Lan7g0113 1899 CDD HECTc 1479 1894 IPR000569 GO:0004842
Lan7g0113 1899 MobiDBLite consensus disorder prediction 1051 1091 - -
Lan7g0113 1899 MobiDBLite consensus disorder prediction 968 1114 - -
Lan7g0113 1899 MobiDBLite consensus disorder prediction 1015 1030 - -
Lan7g0113 1899 PANTHER E3 UBIQUITIN-PROTEIN LIGASE TRIP12 58 1899 IPR045322 GO:0006511|GO:0061630
Lan7g0113 1899 MobiDBLite consensus disorder prediction 660 721 - -
Lan7g0113 1899 MobiDBLite consensus disorder prediction 688 721 - -
Lan7g0113 1899 SUPERFAMILY ARM repeat 184 651 IPR016024 -
Lan7g0113 1899 MobiDBLite consensus disorder prediction 68 87 - -
Lan7g0113 1899 MobiDBLite consensus disorder prediction 660 676 - -
Lan7g0113 1899 MobiDBLite consensus disorder prediction 1 142 - -
Lan7g0113 1899 SMART hect_3 1493 1899 IPR000569 GO:0004842
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan7g0113 Lan-Chr7 648416 659041 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan7g0113 K10590 - gmx:100783336 2905.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan7g0113 7 648416 659041 Lan8g1829 8 24712134 24723219 LSH
Lan7g0113 7 648416 659041 Lan13g0179 13 1097824 1108718 LSH